Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.74■■□□□ 1.07
PRICKLE1Q96MT3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.74■■□□□ 1.07
PRICKLE1Q96MT3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
PRICKLE1Q96MT3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRICKLE1Q96MT3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRICKLE1Q96MT3 AC061975.6-201ENST00000579045 1553 ntBASIC21.74■■□□□ 1.07
PRICKLE1Q96MT3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRICKLE1Q96MT3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.74■■□□□ 1.07
PRICKLE1Q96MT3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRICKLE1Q96MT3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 C11orf96-202ENST00000528572 1834 ntBASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE1Q96MT3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 DUX4L16-201ENST00000555130 1264 ntBASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRICKLE1Q96MT3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE1Q96MT3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 AC008175.2-201ENST00000612840 297 ntBASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 AC007375.3-201ENST00000600936 2314 ntBASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.7■■□□□ 1.06
PRICKLE1Q96MT3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 POU5F1P4-201ENST00000413175 1085 ntBASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 CROCCP5-201ENST00000436658 830 ntBASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 AC026185.1-201ENST00000445748 174 ntBASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 SLC7A5P1-201ENST00000568957 537 ntBASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 AC010536.3-201ENST00000620306 533 ntBASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PRICKLE1Q96MT3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRICKLE1Q96MT3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRICKLE1Q96MT3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRICKLE1Q96MT3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRICKLE1Q96MT3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms