Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00311Q8N616 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINC00311Q8N616 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC00311Q8N616 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00311Q8N616 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINC00311Q8N616 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00311Q8N616 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LINC00311Q8N616 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.07■□□□□ 0.32
LINC00311Q8N616 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00311Q8N616 DUX4L2-201ENST00000561772 1275 ntBASIC17.07■□□□□ 0.32
LINC00311Q8N616 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.07■□□□□ 0.32
LINC00311Q8N616 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
LINC00311Q8N616 DUX4L6-201ENST00000626483 1275 ntBASIC17.07■□□□□ 0.32
LINC00311Q8N616 DUX4L1-201ENST00000627662 1275 ntBASIC17.07■□□□□ 0.32
LINC00311Q8N616 DUX4L8-201ENST00000629013 1275 ntBASIC17.07■□□□□ 0.32
LINC00311Q8N616 DUX4L3-201ENST00000630187 1275 ntBASIC17.07■□□□□ 0.32
LINC00311Q8N616 DUX4L7-201ENST00000630678 1275 ntBASIC17.07■□□□□ 0.32
LINC00311Q8N616 DUX4L5-201ENST00000630834 1275 ntBASIC17.07■□□□□ 0.32
LINC00311Q8N616 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
LINC00311Q8N616 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC00311Q8N616 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00311Q8N616 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.07■□□□□ 0.32
LINC00311Q8N616 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00311Q8N616 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
LINC00311Q8N616 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00311Q8N616 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00311Q8N616 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
LINC00311Q8N616 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC00311Q8N616 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.06■□□□□ 0.32
LINC00311Q8N616 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00311Q8N616 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.06■□□□□ 0.32
LINC00311Q8N616 AC097381.1-201ENST00000429019 1296 ntBASIC17.06■□□□□ 0.32
LINC00311Q8N616 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00311Q8N616 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LINC00311Q8N616 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00311Q8N616 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00311Q8N616 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00311Q8N616 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00311Q8N616 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00311Q8N616 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 KRT16P2-201ENST00000414673 1423 ntBASIC17.05■□□□□ 0.32
LINC00311Q8N616 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00311Q8N616 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00311Q8N616 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00311Q8N616 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00311Q8N616 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 KRT18P20-201ENST00000548986 1279 ntBASIC17.05■□□□□ 0.32
LINC00311Q8N616 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00311Q8N616 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 AC104187.1-201ENST00000607510 612 ntBASIC17.05■□□□□ 0.32
LINC00311Q8N616 MIR6821-201ENST00000617625 74 ntBASIC17.05■□□□□ 0.32
LINC00311Q8N616 AC120498.10-201ENST00000621827 505 ntBASIC17.05■□□□□ 0.32
LINC00311Q8N616 AC061975.6-201ENST00000579045 1553 ntBASIC17.05■□□□□ 0.32
LINC00311Q8N616 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00311Q8N616 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00311Q8N616 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00311Q8N616 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00311Q8N616 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00311Q8N616 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LINC00311Q8N616 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LINC00311Q8N616 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC00311Q8N616 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00311Q8N616 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LINC00311Q8N616 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00311Q8N616 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.04■□□□□ 0.32
LINC00311Q8N616 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.04■□□□□ 0.32
LINC00311Q8N616 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.04■□□□□ 0.32
LINC00311Q8N616 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LINC00311Q8N616 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC00311Q8N616 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00311Q8N616 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
LINC00311Q8N616 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00311Q8N616 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LINC00311Q8N616 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.03■□□□□ 0.32
LINC00311Q8N616 AP001160.3-201ENST00000601484 763 ntBASIC17.03■□□□□ 0.32
LINC00311Q8N616 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LINC00311Q8N616 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 AC005229.4-201ENST00000610085 2198 ntBASIC17.03■□□□□ 0.32
LINC00311Q8N616 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00311Q8N616 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC00311Q8N616 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LINC00311Q8N616 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00311Q8N616 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms