Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.4■■□□□ 1.18
TTC39CQ8N584 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC39CQ8N584 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.4■■□□□ 1.18
TTC39CQ8N584 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TTC39CQ8N584 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC39CQ8N584 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC39CQ8N584 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.4■■□□□ 1.18
TTC39CQ8N584 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TTC39CQ8N584 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TTC39CQ8N584 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TTC39CQ8N584 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.39■■□□□ 1.17
TTC39CQ8N584 AC137761.2-201ENST00000561729 223 ntBASIC22.39■■□□□ 1.17
TTC39CQ8N584 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.39■■□□□ 1.17
TTC39CQ8N584 AC145350.3-201ENST00000569033 163 ntBASIC22.39■■□□□ 1.17
TTC39CQ8N584 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TTC39CQ8N584 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TTC39CQ8N584 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TTC39CQ8N584 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TTC39CQ8N584 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.38■■□□□ 1.17
TTC39CQ8N584 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 AC061975.6-201ENST00000579045 1553 ntBASIC22.38■■□□□ 1.17
TTC39CQ8N584 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
TTC39CQ8N584 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.38■■□□□ 1.17
TTC39CQ8N584 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.38■■□□□ 1.17
TTC39CQ8N584 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.38■■□□□ 1.17
TTC39CQ8N584 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.38■■□□□ 1.17
TTC39CQ8N584 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC39CQ8N584 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.38■■□□□ 1.17
TTC39CQ8N584 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC39CQ8N584 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC39CQ8N584 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
TTC39CQ8N584 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC39CQ8N584 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TTC39CQ8N584 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
TTC39CQ8N584 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC39CQ8N584 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
TTC39CQ8N584 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC39CQ8N584 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.37■■□□□ 1.17
TTC39CQ8N584 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.37■■□□□ 1.17
TTC39CQ8N584 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.37■■□□□ 1.17
TTC39CQ8N584 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
TTC39CQ8N584 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
TTC39CQ8N584 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.36■■□□□ 1.17
TTC39CQ8N584 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC39CQ8N584 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.36■■□□□ 1.17
TTC39CQ8N584 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
TTC39CQ8N584 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC39CQ8N584 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TTC39CQ8N584 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TTC39CQ8N584 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TTC39CQ8N584 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
TTC39CQ8N584 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.36■■□□□ 1.17
TTC39CQ8N584 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.36■■□□□ 1.17
TTC39CQ8N584 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.36■■□□□ 1.17
TTC39CQ8N584 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.36■■□□□ 1.17
TTC39CQ8N584 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.36■■□□□ 1.17
TTC39CQ8N584 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC39CQ8N584 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC39CQ8N584 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TTC39CQ8N584 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.36■■□□□ 1.17
TTC39CQ8N584 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC39CQ8N584 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TTC39CQ8N584 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC39CQ8N584 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC39CQ8N584 AC016769.1-201ENST00000409132 1010 ntBASIC22.35■■□□□ 1.17
TTC39CQ8N584 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
TTC39CQ8N584 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC39CQ8N584 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC39CQ8N584 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TTC39CQ8N584 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.34■■□□□ 1.17
TTC39CQ8N584 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC39CQ8N584 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms