Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 AC139795.1-202ENST00000500444 432 ntBASIC17.44■□□□□ 0.38
ZNF546Q86UE3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZNF546Q86UE3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ZNF546Q86UE3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 AC006128.1-201ENST00000624704 1661 ntBASIC17.42■□□□□ 0.38
ZNF546Q86UE3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
ZNF546Q86UE3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF546Q86UE3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 AC098818.2-201ENST00000564925 2320 ntBASIC17.4■□□□□ 0.38
ZNF546Q86UE3 RARRES2P2-201ENST00000394842 485 ntBASIC17.4■□□□□ 0.38
ZNF546Q86UE3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 AC120024.1-201ENST00000562672 995 ntBASIC17.4■□□□□ 0.38
ZNF546Q86UE3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms