Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39BQ5VTQ0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 AC138907.5-202ENST00000569484 235 ntBASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39BQ5VTQ0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 AC016769.1-201ENST00000409132 1010 ntBASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 KRT18P11-201ENST00000435214 1283 ntBASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39BQ5VTQ0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 AC006015.1-201ENST00000429970 570 ntBASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 AC010141.2-201ENST00000452426 721 ntBASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.85■■□□□ 1.09
TTC39BQ5VTQ0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
TTC39BQ5VTQ0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 AP001160.3-201ENST00000601484 763 ntBASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 IKBKGP1-201ENST00000612193 1073 ntBASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 AC092437.1-201ENST00000624794 1048 ntBASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 AC003102.1-202ENST00000563394 1796 ntBASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39BQ5VTQ0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39BQ5VTQ0 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.83■■□□□ 1.08
TTC39BQ5VTQ0 AC244015.2-201ENST00000616358 1861 ntBASIC21.83■■□□□ 1.08
TTC39BQ5VTQ0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TTC39BQ5VTQ0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
TTC39BQ5VTQ0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.82■■□□□ 1.08
TTC39BQ5VTQ0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms