Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 ERG11YHR007C 1593 nt3.03□□□□□ -1.92
RUP1Q12242 CHO2YGR157W 2610 nt3.03□□□□□ -1.93
RUP1Q12242 CEP3YMR168C 1827 nt3.03□□□□□ -1.93
RUP1Q12242 TRM82YDR165W 1335 nt3.02□□□□□ -1.93
RUP1Q12242 ERP3YDL018C 678 nt3.02□□□□□ -1.93
RUP1Q12242 DTD1YDL219W 453 nt3.02□□□□□ -1.93
RUP1Q12242 COX23YHR116W 456 nt3.02□□□□□ -1.93
RUP1Q12242 CTK2YJL006C 972 nt3.02□□□□□ -1.93
RUP1Q12242 RNH203YLR154C 333 nt3.02□□□□□ -1.93
RUP1Q12242 RPS28BYLR264W 204 nt3.02□□□□□ -1.93
RUP1Q12242 YMR141CYMR141C 309 nt3.02□□□□□ -1.93
RUP1Q12242 TSR4YOL022C 1227 nt3.02□□□□□ -1.93
RUP1Q12242 snR42snR42 351 nt3.02□□□□□ -1.93
RUP1Q12242 DBP7YKR024C 2229 nt3.02□□□□□ -1.93
RUP1Q12242 YAT2YER024W 2772 nt3.02□□□□□ -1.93
RUP1Q12242 MET5YJR137C 4329 nt3.02□□□□□ -1.93
RUP1Q12242 ESL1YIL151C 3357 nt3.01□□□□□ -1.93
RUP1Q12242 TFC4YGR047C 3078 nt3.01□□□□□ -1.93
RUP1Q12242 PIG2YIL045W 1617 nt3.01□□□□□ -1.93
RUP1Q12242 YDR170W-AYDR170W-A 1323 nt3.01□□□□□ -1.93
RUP1Q12242 YBL005W-AYBL005W-A 1323 nt3.01□□□□□ -1.93
RUP1Q12242 YMR046CYMR046C 1323 nt3.01□□□□□ -1.93
RUP1Q12242 YNL284C-AYNL284C-A 1323 nt3.01□□□□□ -1.93
RUP1Q12242 NDC80YIL144W 2076 nt3.01□□□□□ -1.93
RUP1Q12242 RTT105YER104W 627 nt3.01□□□□□ -1.93
RUP1Q12242 CDC26YFR036W 375 nt3.01□□□□□ -1.93
RUP1Q12242 YGL214WYGL214W 486 nt3.01□□□□□ -1.93
RUP1Q12242 YKL091CYKL091C 933 nt3.01□□□□□ -1.93
RUP1Q12242 YBR053CYBR053C 1077 nt3.01□□□□□ -1.93
RUP1Q12242 snR35snR35 204 nt3.01□□□□□ -1.93
RUP1Q12242 MED8YBR193C 672 nt3.01□□□□□ -1.93
RUP1Q12242 VIP1YLR410W 3441 nt3.01□□□□□ -1.93
RUP1Q12242 YTA7YGR270W 4140 nt3□□□□□ -1.93
RUP1Q12242 YHL002C-AYHL002C-A 489 nt3□□□□□ -1.93
RUP1Q12242 YHL048C-AYHL048C-A 135 nt3□□□□□ -1.93
RUP1Q12242 YLL037WYLL037W 381 nt3□□□□□ -1.93
RUP1Q12242 YOR073W-AYOR073W-A 234 nt3□□□□□ -1.93
RUP1Q12242 GCY1YOR120W 939 nt3□□□□□ -1.93
RUP1Q12242 CIN2YPL241C 807 nt3□□□□□ -1.93
RUP1Q12242 LTP1YPR073C 486 nt3□□□□□ -1.93
RUP1Q12242 SLM4YBR077C 489 nt3□□□□□ -1.93
RUP1Q12242 YBR201C-AYBR201C-A 204 nt3□□□□□ -1.93
RUP1Q12242 MMS1YPR164W 4224 nt3□□□□□ -1.93
RUP1Q12242 INP52YNL106C 3552 nt3□□□□□ -1.93
RUP1Q12242 CCT7YJL111W 1653 nt3□□□□□ -1.93
RUP1Q12242 SAG1YJR004C 1953 nt3□□□□□ -1.93
RUP1Q12242 YDR320W-BYDR320W-B 138 nt2.99□□□□□ -1.93
RUP1Q12242 NSA2YER126C 786 nt2.99□□□□□ -1.93
RUP1Q12242 YFH7YFR007W 1062 nt2.99□□□□□ -1.93
RUP1Q12242 GTR2YGR163W 1026 nt2.99□□□□□ -1.93
RUP1Q12242 GPX1YKL026C 504 nt2.99□□□□□ -1.93
RUP1Q12242 RPS30AYLR287C-A 192 nt2.99□□□□□ -1.93
RUP1Q12242 OST6YML019W 999 nt2.99□□□□□ -1.93
RUP1Q12242 RPL19BYBL027W 570 nt2.99□□□□□ -1.93
RUP1Q12242 SUB1YMR039C 879 nt2.99□□□□□ -1.93
RUP1Q12242 SSN8YNL025C 972 nt2.99□□□□□ -1.93
RUP1Q12242 PEX27YOR193W 1131 nt2.99□□□□□ -1.93
RUP1Q12242 SPR2YOR214C 711 nt2.99□□□□□ -1.93
RUP1Q12242 MGE1YOR232W 687 nt2.99□□□□□ -1.93
RUP1Q12242 RFC5YBR087W 1065 nt2.99□□□□□ -1.93
RUP1Q12242 snR24snR24 89 nt2.99□□□□□ -1.93
RUP1Q12242 RED1YLR263W 2484 nt2.99□□□□□ -1.93
RUP1Q12242 YPD1YDL235C 504 nt2.98□□□□□ -1.93
RUP1Q12242 ATC1YDR184C 885 nt2.98□□□□□ -1.93
RUP1Q12242 MRPL9YGR220C 810 nt2.98□□□□□ -1.93
RUP1Q12242 GOS1YHL031C 672 nt2.98□□□□□ -1.93
RUP1Q12242 YIL046W-AYIL046W-A 165 nt2.98□□□□□ -1.93
RUP1Q12242 YJL114WYJL114W 681 nt2.98□□□□□ -1.93
RUP1Q12242 YKL070WYKL070W 510 nt2.98□□□□□ -1.93
RUP1Q12242 SMD2YLR275W 333 nt2.98□□□□□ -1.93
RUP1Q12242 ILV5YLR355C 1188 nt2.98□□□□□ -1.93
RUP1Q12242 RPL6BYLR448W 531 nt2.98□□□□□ -1.93
RUP1Q12242 FAR3YMR052W 615 nt2.98□□□□□ -1.93
RUP1Q12242 YBL068W-AYBL068W-A 237 nt2.98□□□□□ -1.93
RUP1Q12242 AEP1YMR064W 1557 nt2.98□□□□□ -1.93
RUP1Q12242 MUS81YDR386W 1899 nt2.98□□□□□ -1.93
RUP1Q12242 SRP68YPL243W 1800 nt2.98□□□□□ -1.93
RUP1Q12242 NTO1YPR031W 2247 nt2.97□□□□□ -1.93
RUP1Q12242 TPO5YKL174C 1857 nt2.97□□□□□ -1.93
RUP1Q12242 LCB4YOR171C 1875 nt2.97□□□□□ -1.93
RUP1Q12242 Q0255Q0255 1419 nt2.97□□□□□ -1.93
RUP1Q12242 MIG2YGL209W 1149 nt2.97□□□□□ -1.93
RUP1Q12242 RSM27YGR215W 333 nt2.97□□□□□ -1.93
RUP1Q12242 SDP1YIL113W 630 nt2.97□□□□□ -1.93
RUP1Q12242 YJL175WYJL175W 513 nt2.97□□□□□ -1.93
RUP1Q12242 SPP382YLR424W 2127 nt2.97□□□□□ -1.93
RUP1Q12242 IPP1YBR011C 864 nt2.97□□□□□ -1.93
RUP1Q12242 GIS4YML006C 2325 nt2.97□□□□□ -1.93
RUP1Q12242 YNL011CYNL011C 1335 nt2.96□□□□□ -1.93
RUP1Q12242 CDC20YGL116W 1833 nt2.96□□□□□ -1.94
RUP1Q12242 RPL13AYDL082W 600 nt2.96□□□□□ -1.94
RUP1Q12242 MIX14YDR031W 366 nt2.96□□□□□ -1.94
RUP1Q12242 NRG1YDR043C 696 nt2.96□□□□□ -1.94
RUP1Q12242 YDR193WYDR193W 399 nt2.96□□□□□ -1.94
RUP1Q12242 HLR1YDR528W 1272 nt2.96□□□□□ -1.94
RUP1Q12242 YHR180WYHR180W 492 nt2.96□□□□□ -1.94
RUP1Q12242 YHR214C-DYHR214C-D 294 nt2.96□□□□□ -1.94
RUP1Q12242 RPA12YJR063W 378 nt2.96□□□□□ -1.94
RUP1Q12242 YAR069CYAR069C 294 nt2.96□□□□□ -1.94
RUP1Q12242 YLR297WYLR297W 390 nt2.96□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms