Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 IMP3YHR148W 552 nt2.52□□□□□ -2.01
RRP40Q08285 YIR023C-AYIR023C-A 324 nt2.52□□□□□ -2.01
RRP40Q08285 RPS22AYJL190C 393 nt2.52□□□□□ -2.01
RRP40Q08285 RED1YLR263W 2484 nt2.51□□□□□ -2.01
RRP40Q08285 ECM11YDR446W 909 nt2.51□□□□□ -2.01
RRP40Q08285 YFR010W-AYFR010W-A 189 nt2.51□□□□□ -2.01
RRP40Q08285 YGL138CYGL138C 1038 nt2.51□□□□□ -2.01
RRP40Q08285 BRR6YGL247W 594 nt2.51□□□□□ -2.01
RRP40Q08285 YIL174WYIL174W 228 nt2.51□□□□□ -2.01
RRP40Q08285 YJL222W-AYJL222W-A 228 nt2.51□□□□□ -2.01
RRP40Q08285 ARC19YKL013C 516 nt2.51□□□□□ -2.01
RRP40Q08285 YLR042CYLR042C 486 nt2.51□□□□□ -2.01
RRP40Q08285 NDL1YLR254C 570 nt2.51□□□□□ -2.01
RRP40Q08285 YMR075C-AYMR075C-A 366 nt2.51□□□□□ -2.01
RRP40Q08285 RCE1YMR274C 948 nt2.51□□□□□ -2.01
RRP40Q08285 SSP2YOR242C 1116 nt2.51□□□□□ -2.01
RRP40Q08285 ARA1YBR149W 1035 nt2.51□□□□□ -2.01
RRP40Q08285 BNI4YNL233W 2679 nt2.51□□□□□ -2.01
RRP40Q08285 YDR239CYDR239C 2364 nt2.51□□□□□ -2.01
RRP40Q08285 WHI3YNL197C 1986 nt2.5□□□□□ -2.01
RRP40Q08285 GYL1YMR192W 2163 nt2.5□□□□□ -2.01
RRP40Q08285 ICR1ICR1 3199 nt2.5□□□□□ -2.01
RRP40Q08285 RRG1YDR065W 1098 nt2.5□□□□□ -2.01
RRP40Q08285 tW(CCA)G1tW(CCA)G1 72 nt2.5□□□□□ -2.01
RRP40Q08285 tW(CCA)G2tW(CCA)G2 72 nt2.5□□□□□ -2.01
RRP40Q08285 tW(CCA)JtW(CCA)J 72 nt2.5□□□□□ -2.01
RRP40Q08285 tW(CCA)KtW(CCA)K 72 nt2.5□□□□□ -2.01
RRP40Q08285 tW(CCA)MtW(CCA)M 72 nt2.5□□□□□ -2.01
RRP40Q08285 tW(CCA)PtW(CCA)P 72 nt2.5□□□□□ -2.01
RRP40Q08285 YLR076CYLR076C 423 nt2.5□□□□□ -2.01
RRP40Q08285 RPL20AYMR242C 519 nt2.5□□□□□ -2.01
RRP40Q08285 DUG3YNL191W 1074 nt2.5□□□□□ -2.01
RRP40Q08285 GEA1YJR031C 4227 nt2.5□□□□□ -2.01
RRP40Q08285 MMS1YPR164W 4224 nt2.5□□□□□ -2.01
RRP40Q08285 MUS81YDR386W 1899 nt2.5□□□□□ -2.01
RRP40Q08285 UTP14YML093W 2700 nt2.49□□□□□ -2.01
RRP40Q08285 HYP2YEL034W 474 nt2.49□□□□□ -2.01
RRP40Q08285 RTT105YER104W 627 nt2.49□□□□□ -2.01
RRP40Q08285 RNR2YJL026W 1200 nt2.49□□□□□ -2.01
RRP40Q08285 RPL17BYJL177W 555 nt2.49□□□□□ -2.01
RRP40Q08285 YJL132WYJL132W 2253 nt2.49□□□□□ -2.01
RRP40Q08285 BCK1YJL095W 4437 nt2.48□□□□□ -2.01
RRP40Q08285 MED1YPR070W 1701 nt2.48□□□□□ -2.01
RRP40Q08285 RSE1YML049C 4086 nt2.48□□□□□ -2.01
RRP40Q08285 YER066C-AYER066C-A 501 nt2.48□□□□□ -2.01
RRP40Q08285 MPS2YGL075C 1164 nt2.48□□□□□ -2.01
RRP40Q08285 YIP5YGL161C 933 nt2.48□□□□□ -2.01
RRP40Q08285 YGR160WYGR160W 612 nt2.48□□□□□ -2.01
RRP40Q08285 RGI2YIL057C 495 nt2.48□□□□□ -2.01
RRP40Q08285 YLR400WYLR400W 474 nt2.48□□□□□ -2.01
RRP40Q08285 INO4YOL108C 456 nt2.48□□□□□ -2.01
RRP40Q08285 YOR203WYOR203W 354 nt2.48□□□□□ -2.01
RRP40Q08285 MCT1YOR221C 1083 nt2.48□□□□□ -2.01
RRP40Q08285 ATG29YPL166W 642 nt2.48□□□□□ -2.01
RRP40Q08285 SUT2YPR009W 807 nt2.48□□□□□ -2.01
RRP40Q08285 SAD1YFR005C 1347 nt2.47□□□□□ -2.01
RRP40Q08285 TAF2YCR042C 4224 nt2.47□□□□□ -2.01
RRP40Q08285 NAB3YPL190C 2409 nt2.47□□□□□ -2.01
RRP40Q08285 SST2YLR452C 2097 nt2.47□□□□□ -2.01
RRP40Q08285 YDR320W-BYDR320W-B 138 nt2.47□□□□□ -2.01
RRP40Q08285 RPB9YGL070C 369 nt2.47□□□□□ -2.01
RRP40Q08285 PRP18YGR006W 756 nt2.47□□□□□ -2.01
RRP40Q08285 SYS1YJL004C 612 nt2.47□□□□□ -2.01
RRP40Q08285 MRPL38YKL170W 417 nt2.47□□□□□ -2.01
RRP40Q08285 YLR365WYLR365W 333 nt2.47□□□□□ -2.01
RRP40Q08285 RPL23AYBL087C 414 nt2.47□□□□□ -2.01
RRP40Q08285 RIT1YMR283C 1542 nt2.47□□□□□ -2.01
RRP40Q08285 MPS1YDL028C 2295 nt2.47□□□□□ -2.01
RRP40Q08285 APC5YOR249C 2058 nt2.46□□□□□ -2.01
RRP40Q08285 PSK1YAL017W 4071 nt2.46□□□□□ -2.02
RRP40Q08285 YLR001CYLR001C 2589 nt2.46□□□□□ -2.02
RRP40Q08285 MMF1YIL051C 438 nt2.46□□□□□ -2.02
RRP40Q08285 SAW1YAL027W 786 nt2.46□□□□□ -2.02
RRP40Q08285 YJR056CYJR056C 711 nt2.46□□□□□ -2.02
RRP40Q08285 YKL066WYKL066W 444 nt2.46□□□□□ -2.02
RRP40Q08285 NNT1YLR285W 786 nt2.46□□□□□ -2.02
RRP40Q08285 YLR347W-AYLR347W-A 141 nt2.46□□□□□ -2.02
RRP40Q08285 YOL166CYOL166C 339 nt2.46□□□□□ -2.02
RRP40Q08285 IRC14YOR135C 342 nt2.46□□□□□ -2.02
RRP40Q08285 RRP7YCL031C 894 nt2.46□□□□□ -2.02
RRP40Q08285 SWR1YDR334W 4545 nt2.46□□□□□ -2.02
RRP40Q08285 21S_rRNA21S_rRNA 3296 nt2.46□□□□□ -2.02
RRP40Q08285 IKI3YLR384C 4050 nt2.46□□□□□ -2.02
RRP40Q08285 ENP2YGR145W 2124 nt2.45□□□□□ -2.02
RRP40Q08285 FKS3YMR306W 5358 nt2.45□□□□□ -2.02
RRP40Q08285 DNA2YHR164C 4569 nt2.45□□□□□ -2.02
RRP40Q08285 snR70snR70 164 nt2.45□□□□□ -2.02
RRP40Q08285 COBQ0105 1158 nt2.45□□□□□ -2.02
RRP40Q08285 RPL14BYHL001W 417 nt2.45□□□□□ -2.02
RRP40Q08285 PEX18YHR160C 852 nt2.45□□□□□ -2.02
RRP40Q08285 YJR071WYJR071W 369 nt2.45□□□□□ -2.02
RRP40Q08285 OMA1YKR087C 1038 nt2.45□□□□□ -2.02
RRP40Q08285 SED5YLR026C 1023 nt2.45□□□□□ -2.02
RRP40Q08285 PSY3YLR376C 729 nt2.45□□□□□ -2.02
RRP40Q08285 YNL171CYNL171C 369 nt2.45□□□□□ -2.02
RRP40Q08285 YNL203CYNL203C 612 nt2.45□□□□□ -2.02
RRP40Q08285 MPP6YNR024W 561 nt2.45□□□□□ -2.02
RRP40Q08285 KAR5YMR065W 1515 nt2.45□□□□□ -2.02
RRP40Q08285 RIX1YHR197W 2292 nt2.45□□□□□ -2.02
RRP40Q08285 SGM1YJR134C 2124 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms