Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.18■□□□□ 0.98
LIMK2P53671 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK2P53671 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.18■□□□□ 0.98
LIMK2P53671 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.18■□□□□ 0.98
LIMK2P53671 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.18■□□□□ 0.98
LIMK2P53671 AL137784.2-201ENST00000607332 1000 ntBASIC21.18■□□□□ 0.98
LIMK2P53671 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.18■□□□□ 0.98
LIMK2P53671 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LIMK2P53671 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK2P53671 AP006587.3-201ENST00000525742 1516 ntBASIC21.18■□□□□ 0.98
LIMK2P53671 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK2P53671 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK2P53671 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LIMK2P53671 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK2P53671 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LIMK2P53671 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LIMK2P53671 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK2P53671 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK2P53671 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.17■□□□□ 0.98
LIMK2P53671 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LIMK2P53671 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK2P53671 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK2P53671 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.17■□□□□ 0.98
LIMK2P53671 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK2P53671 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK2P53671 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK2P53671 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
LIMK2P53671 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
LIMK2P53671 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.17■□□□□ 0.98
LIMK2P53671 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK2P53671 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK2P53671 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK2P53671 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK2P53671 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK2P53671 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.16■□□□□ 0.98
LIMK2P53671 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LIMK2P53671 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.16■□□□□ 0.98
LIMK2P53671 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK2P53671 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK2P53671 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.16■□□□□ 0.98
LIMK2P53671 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.16■□□□□ 0.98
LIMK2P53671 NTF6G-201ENST00000591094 616 ntBASIC21.16■□□□□ 0.98
LIMK2P53671 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK2P53671 RARRES2P11-201ENST00000635158 484 ntBASIC21.16■□□□□ 0.98
LIMK2P53671 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
LIMK2P53671 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK2P53671 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.16■□□□□ 0.98
LIMK2P53671 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK2P53671 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK2P53671 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK2P53671 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.15■□□□□ 0.98
LIMK2P53671 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
LIMK2P53671 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.15■□□□□ 0.98
LIMK2P53671 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIMK2P53671 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIMK2P53671 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.15■□□□□ 0.98
LIMK2P53671 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.15■□□□□ 0.98
LIMK2P53671 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.15■□□□□ 0.98
LIMK2P53671 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.15■□□□□ 0.98
LIMK2P53671 AC092437.1-201ENST00000624794 1048 ntBASIC21.15■□□□□ 0.98
LIMK2P53671 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.15■□□□□ 0.98
LIMK2P53671 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.15■□□□□ 0.98
LIMK2P53671 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIMK2P53671 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.14■□□□□ 0.98
LIMK2P53671 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.14■□□□□ 0.98
LIMK2P53671 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
LIMK2P53671 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LIMK2P53671 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.14■□□□□ 0.98
LIMK2P53671 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.14■□□□□ 0.98
LIMK2P53671 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
LIMK2P53671 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LIMK2P53671 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LIMK2P53671 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
LIMK2P53671 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.14■□□□□ 0.97
LIMK2P53671 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.14■□□□□ 0.97
LIMK2P53671 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.14■□□□□ 0.97
LIMK2P53671 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.14■□□□□ 0.97
LIMK2P53671 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.14■□□□□ 0.97
LIMK2P53671 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.14■□□□□ 0.97
LIMK2P53671 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.14■□□□□ 0.97
LIMK2P53671 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.14■□□□□ 0.97
LIMK2P53671 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LIMK2P53671 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LIMK2P53671 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
LIMK2P53671 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
LIMK2P53671 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.14■□□□□ 0.97
LIMK2P53671 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK2P53671 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK2P53671 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.13■□□□□ 0.97
LIMK2P53671 AL049796.1-201ENST00000565336 1766 ntBASIC21.13■□□□□ 0.97
LIMK2P53671 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.13■□□□□ 0.97
LIMK2P53671 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK2P53671 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.13■□□□□ 0.97
LIMK2P53671 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK2P53671 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK2P53671 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.13■□□□□ 0.97
LIMK2P53671 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.13■□□□□ 0.97
LIMK2P53671 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LIMK2P53671 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.13■□□□□ 0.97
LIMK2P53671 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms