Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 RRG7YOR305W 729 nt2.62□□□□□ -1.99
CDC40P40968 CHS2YBR038W 2892 nt2.62□□□□□ -1.99
CDC40P40968 YCR085WYCR085W 354 nt2.61□□□□□ -1.99
CDC40P40968 COG7YGL005C 840 nt2.61□□□□□ -1.99
CDC40P40968 RSR1YGR152C 819 nt2.61□□□□□ -1.99
CDC40P40968 RRD2YPL152W 1077 nt2.61□□□□□ -1.99
CDC40P40968 TRM82YDR165W 1335 nt2.61□□□□□ -1.99
CDC40P40968 YDR098C-BYDR098C-B 5268 nt2.61□□□□□ -1.99
CDC40P40968 YDR210C-DYDR210C-D 5268 nt2.61□□□□□ -1.99
CDC40P40968 YDR316W-BYDR316W-B 5268 nt2.61□□□□□ -1.99
CDC40P40968 YDR365W-BYDR365W-B 5268 nt2.61□□□□□ -1.99
CDC40P40968 YER138CYER138C 5268 nt2.61□□□□□ -1.99
CDC40P40968 YER160CYER160C 5268 nt2.61□□□□□ -1.99
CDC40P40968 YGR038C-BYGR038C-B 5268 nt2.61□□□□□ -1.99
CDC40P40968 YGR161C-DYGR161C-D 5268 nt2.61□□□□□ -1.99
CDC40P40968 YJR027WYJR027W 5268 nt2.61□□□□□ -1.99
CDC40P40968 YLR157C-BYLR157C-B 5268 nt2.61□□□□□ -1.99
CDC40P40968 YML039WYML039W 5268 nt2.61□□□□□ -1.99
CDC40P40968 YML045WYML045W 5268 nt2.61□□□□□ -1.99
CDC40P40968 YMR050CYMR050C 5268 nt2.61□□□□□ -1.99
CDC40P40968 YOL103W-BYOL103W-B 5268 nt2.61□□□□□ -1.99
CDC40P40968 YBR012W-BYBR012W-B 5271 nt2.61□□□□□ -1.99
CDC40P40968 YOR142W-BYOR142W-B 5268 nt2.61□□□□□ -1.99
CDC40P40968 YPL257W-BYPL257W-B 5268 nt2.61□□□□□ -1.99
CDC40P40968 YPR158W-BYPR158W-B 5271 nt2.61□□□□□ -1.99
CDC40P40968 UBP14YBR058C 2346 nt2.6□□□□□ -1.99
CDC40P40968 MDM10YAL010C 1482 nt2.6□□□□□ -1.99
CDC40P40968 NOP56YLR197W 1515 nt2.6□□□□□ -1.99
CDC40P40968 YGR017WYGR017W 894 nt2.6□□□□□ -1.99
CDC40P40968 COX23YHR116W 456 nt2.6□□□□□ -1.99
CDC40P40968 TMA19YKL056C 504 nt2.6□□□□□ -1.99
CDC40P40968 SRL3YKR091W 741 nt2.6□□□□□ -1.99
CDC40P40968 YMR294W-AYMR294W-A 360 nt2.6□□□□□ -1.99
CDC40P40968 STE6YKL209C 3873 nt2.6□□□□□ -1.99
CDC40P40968 SKT5YBL061C 2091 nt2.6□□□□□ -1.99
CDC40P40968 RPA190YOR341W 4995 nt2.6□□□□□ -1.99
CDC40P40968 ARK1YNL020C 1917 nt2.6□□□□□ -1.99
CDC40P40968 URB2YJR041C 3525 nt2.59□□□□□ -1.99
CDC40P40968 SNQ2YDR011W 4506 nt2.59□□□□□ -1.99
CDC40P40968 NRG1YDR043C 696 nt2.59□□□□□ -1.99
CDC40P40968 YGR270C-AYGR270C-A 219 nt2.59□□□□□ -1.99
CDC40P40968 YJL114WYJL114W 681 nt2.59□□□□□ -1.99
CDC40P40968 REC102YLR329W 795 nt2.59□□□□□ -1.99
CDC40P40968 YML094C-AYML094C-A 402 nt2.59□□□□□ -1.99
CDC40P40968 TAF3YPL011C 1062 nt2.59□□□□□ -1.99
CDC40P40968 VPS30YPL120W 1674 nt2.59□□□□□ -2
CDC40P40968 PSD2YGR170W 3417 nt2.59□□□□□ -2
CDC40P40968 YJL049WYJL049W 1353 nt2.59□□□□□ -2
CDC40P40968 CWC22YGR278W 1734 nt2.59□□□□□ -2
CDC40P40968 YBT1YLL048C 4986 nt2.59□□□□□ -2
CDC40P40968 SWC4YGR002C 1431 nt2.59□□□□□ -2
CDC40P40968 AEP1YMR064W 1557 nt2.58□□□□□ -2
CDC40P40968 YCR016WYCR016W 873 nt2.58□□□□□ -2
CDC40P40968 MAM1YER106W 909 nt2.58□□□□□ -2
CDC40P40968 YJL175WYJL175W 513 nt2.58□□□□□ -2
CDC40P40968 SFT1YKL006C-A 294 nt2.58□□□□□ -2
CDC40P40968 YKL131WYKL131W 522 nt2.58□□□□□ -2
CDC40P40968 RPL8BYLL045C 771 nt2.58□□□□□ -2
CDC40P40968 YLR347W-AYLR347W-A 141 nt2.58□□□□□ -2
CDC40P40968 AIM36YMR157C 768 nt2.58□□□□□ -2
CDC40P40968 DYN3YMR299C 939 nt2.58□□□□□ -2
CDC40P40968 MER1YNL210W 813 nt2.58□□□□□ -2
CDC40P40968 YBR013CYBR013C 390 nt2.58□□□□□ -2
CDC40P40968 CIN8YEL061C 3003 nt2.58□□□□□ -2
CDC40P40968 ROM1YGR070W 3468 nt2.58□□□□□ -2
CDC40P40968 CHO2YGR157W 2610 nt2.58□□□□□ -2
CDC40P40968 DUG2YBR281C 2637 nt2.58□□□□□ -2
CDC40P40968 CMK1YFR014C 1341 nt2.58□□□□□ -2
CDC40P40968 SPO14YKR031C 5052 nt2.58□□□□□ -2
CDC40P40968 KAP104YBR017C 2757 nt2.58□□□□□ -2
CDC40P40968 TFB1YDR311W 1929 nt2.58□□□□□ -2
CDC40P40968 ADY4YLR227C 1482 nt2.58□□□□□ -2
CDC40P40968 BSC1YDL037C 987 nt2.57□□□□□ -2
CDC40P40968 SHR3YDL212W 633 nt2.57□□□□□ -2
CDC40P40968 CPR5YDR304C 678 nt2.57□□□□□ -2
CDC40P40968 EMI1YDR512C 564 nt2.57□□□□□ -2
CDC40P40968 YGL242CYGL242C 546 nt2.57□□□□□ -2
CDC40P40968 DOG2YHR043C 741 nt2.57□□□□□ -2
CDC40P40968 YHR180WYHR180W 492 nt2.57□□□□□ -2
CDC40P40968 YIL046W-AYIL046W-A 165 nt2.57□□□□□ -2
CDC40P40968 YAL031W-AYAL031W-A 309 nt2.57□□□□□ -2
CDC40P40968 ARC18YLR370C 537 nt2.57□□□□□ -2
CDC40P40968 YNL320WYNL320W 855 nt2.57□□□□□ -2
CDC40P40968 HUT1YPL244C 1020 nt2.57□□□□□ -2
CDC40P40968 RPC40YPR110C 1008 nt2.57□□□□□ -2
CDC40P40968 PCI8YIL071C 1335 nt2.57□□□□□ -2
CDC40P40968 PIG2YIL045W 1617 nt2.57□□□□□ -2
CDC40P40968 DBP7YKR024C 2229 nt2.56□□□□□ -2
CDC40P40968 COP1YDL145C 3606 nt2.56□□□□□ -2
CDC40P40968 BUD26YDR241W 288 nt2.56□□□□□ -2
CDC40P40968 AGE2YIL044C 897 nt2.56□□□□□ -2
CDC40P40968 SRT1YMR101C 1032 nt2.56□□□□□ -2
CDC40P40968 ERT1YBR239C 1590 nt2.56□□□□□ -2
CDC40P40968 JJJ2YJL162C 1752 nt2.56□□□□□ -2
CDC40P40968 ATG13YPR185W 2217 nt2.56□□□□□ -2
CDC40P40968 NMA111YNL123W 2994 nt2.55□□□□□ -2
CDC40P40968 YDL071CYDL071C 375 nt2.55□□□□□ -2
CDC40P40968 RSM24YDR175C 960 nt2.55□□□□□ -2
CDC40P40968 RPN9YDR427W 1182 nt2.55□□□□□ -2
CDC40P40968 AGE1YDR524C 1449 nt2.55□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 61.2 ms