Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM23P36406 AC104771.1-201ENST00000603335 964 ntBASIC20.78■□□□□ 0.92
TRIM23P36406 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM23P36406 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM23P36406 AC068338.2-201ENST00000563278 1430 ntBASIC20.78■□□□□ 0.92
TRIM23P36406 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRIM23P36406 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRIM23P36406 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM23P36406 GPX1P1-201ENST00000388829 606 ntBASIC20.77■□□□□ 0.92
TRIM23P36406 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM23P36406 AL121832.2-201ENST00000610979 668 ntBASIC20.77■□□□□ 0.92
TRIM23P36406 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM23P36406 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM23P36406 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRIM23P36406 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM23P36406 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM23P36406 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM23P36406 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM23P36406 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM23P36406 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM23P36406 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM23P36406 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM23P36406 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.76■□□□□ 0.91
TRIM23P36406 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM23P36406 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM23P36406 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM23P36406 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM23P36406 AC083906.2-201ENST00000511578 360 ntBASIC20.76■□□□□ 0.91
TRIM23P36406 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM23P36406 AC133552.2-202ENST00000575694 574 ntBASIC20.76■□□□□ 0.91
TRIM23P36406 AL109923.1-201ENST00000618799 583 ntBASIC20.76■□□□□ 0.91
TRIM23P36406 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRIM23P36406 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM23P36406 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM23P36406 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM23P36406 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM23P36406 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM23P36406 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM23P36406 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TRIM23P36406 AL117328.2-201ENST00000624617 1940 ntBASIC20.75■□□□□ 0.91
TRIM23P36406 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM23P36406 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM23P36406 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM23P36406 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM23P36406 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM23P36406 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.75■□□□□ 0.91
TRIM23P36406 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM23P36406 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM23P36406 C11orf96-202ENST00000528572 1834 ntBASIC20.75■□□□□ 0.91
TRIM23P36406 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM23P36406 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM23P36406 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM23P36406 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM23P36406 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TRIM23P36406 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM23P36406 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM23P36406 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
TRIM23P36406 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM23P36406 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM23P36406 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM23P36406 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM23P36406 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM23P36406 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM23P36406 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM23P36406 AL162412.1-201ENST00000567129 965 ntBASIC20.73■□□□□ 0.91
TRIM23P36406 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM23P36406 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM23P36406 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM23P36406 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM23P36406 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM23P36406 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM23P36406 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM23P36406 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TRIM23P36406 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM23P36406 TSPY6P-201ENST00000448518 926 ntBASIC20.72■□□□□ 0.91
TRIM23P36406 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM23P36406 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM23P36406 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM23P36406 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM23P36406 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM23P36406 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM23P36406 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM23P36406 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM23P36406 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM23P36406 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM23P36406 GUSBP6-202ENST00000438529 1198 ntBASIC20.71■□□□□ 0.91
TRIM23P36406 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM23P36406 AF201337.1-201ENST00000520239 748 ntBASIC20.71■□□□□ 0.91
TRIM23P36406 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM23P36406 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms