Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NELFEP18615 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.68■□□□□ 0.9
NELFEP18615 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NELFEP18615 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.68■□□□□ 0.9
NELFEP18615 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NELFEP18615 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NELFEP18615 KRT19P1-201ENST00000405746 1186 ntBASIC20.68■□□□□ 0.9
NELFEP18615 AC006015.1-201ENST00000429970 570 ntBASIC20.68■□□□□ 0.9
NELFEP18615 AC137761.2-201ENST00000561729 223 ntBASIC20.68■□□□□ 0.9
NELFEP18615 AC145350.3-201ENST00000569033 163 ntBASIC20.68■□□□□ 0.9
NELFEP18615 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.68■□□□□ 0.9
NELFEP18615 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NELFEP18615 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NELFEP18615 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.68■□□□□ 0.9
NELFEP18615 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.68■□□□□ 0.9
NELFEP18615 AC080038.3-201ENST00000623346 1952 ntBASIC20.68■□□□□ 0.9
NELFEP18615 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NELFEP18615 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NELFEP18615 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NELFEP18615 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NELFEP18615 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NELFEP18615 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NELFEP18615 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
NELFEP18615 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NELFEP18615 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NELFEP18615 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.67■□□□□ 0.9
NELFEP18615 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NELFEP18615 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NELFEP18615 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.66■□□□□ 0.9
NELFEP18615 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.66■□□□□ 0.9
NELFEP18615 AC016769.1-201ENST00000409132 1010 ntBASIC20.66■□□□□ 0.9
NELFEP18615 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.66■□□□□ 0.9
NELFEP18615 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.66■□□□□ 0.9
NELFEP18615 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.66■□□□□ 0.9
NELFEP18615 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NELFEP18615 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.66■□□□□ 0.9
NELFEP18615 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.66■□□□□ 0.9
NELFEP18615 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.66■□□□□ 0.9
NELFEP18615 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NELFEP18615 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NELFEP18615 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NELFEP18615 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NELFEP18615 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NELFEP18615 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.66■□□□□ 0.9
NELFEP18615 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NELFEP18615 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NELFEP18615 AC092667.1-201ENST00000434301 2586 ntBASIC20.65■□□□□ 0.9
NELFEP18615 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NELFEP18615 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NELFEP18615 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NELFEP18615 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NELFEP18615 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
NELFEP18615 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.65■□□□□ 0.9
NELFEP18615 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.65■□□□□ 0.9
NELFEP18615 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.65■□□□□ 0.9
NELFEP18615 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NELFEP18615 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NELFEP18615 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NELFEP18615 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NELFEP18615 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NELFEP18615 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NELFEP18615 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.64■□□□□ 0.9
NELFEP18615 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NELFEP18615 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NELFEP18615 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NELFEP18615 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.64■□□□□ 0.89
NELFEP18615 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NELFEP18615 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.64■□□□□ 0.89
NELFEP18615 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NELFEP18615 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NELFEP18615 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NELFEP18615 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.64■□□□□ 0.89
NELFEP18615 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.63■□□□□ 0.89
NELFEP18615 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NELFEP18615 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.63■□□□□ 0.89
NELFEP18615 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NELFEP18615 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.63■□□□□ 0.89
NELFEP18615 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
NELFEP18615 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms