Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHGAP10645 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHGAP10645 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CHGAP10645 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
CHGAP10645 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC30.4■■■□□ 2.46
CHGAP10645 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHGAP10645 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHGAP10645 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
CHGAP10645 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHGAP10645 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHGAP10645 AC093323.1-202ENST00000635031 2045 ntBASIC30.39■■■□□ 2.46
CHGAP10645 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC30.39■■■□□ 2.46
CHGAP10645 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHGAP10645 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30.39■■■□□ 2.46
CHGAP10645 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC30.39■■■□□ 2.46
CHGAP10645 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHGAP10645 GATS-209ENST00000454084 1030 ntTSL 3 BASIC30.39■■■□□ 2.46
CHGAP10645 AP003097.1-201ENST00000530657 1135 ntBASIC30.39■■■□□ 2.46
CHGAP10645 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHGAP10645 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHGAP10645 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC30.39■■■□□ 2.46
CHGAP10645 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHGAP10645 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC30.39■■■□□ 2.46
CHGAP10645 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHGAP10645 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHGAP10645 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHGAP10645 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC30.38■■■□□ 2.45
CHGAP10645 CASP6-205ENST00000505486 538 ntTSL 4 BASIC30.38■■■□□ 2.45
CHGAP10645 CD44-222ENST00000526025 1052 ntTSL 2 BASIC30.38■■■□□ 2.45
CHGAP10645 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC30.38■■■□□ 2.45
CHGAP10645 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC30.38■■■□□ 2.45
CHGAP10645 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC30.38■■■□□ 2.45
CHGAP10645 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CHGAP10645 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CHGAP10645 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CHGAP10645 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CHGAP10645 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHGAP10645 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHGAP10645 BAALC-201ENST00000297574 801 ntTSL 3 BASIC30.37■■■□□ 2.45
CHGAP10645 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHGAP10645 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC30.37■■■□□ 2.45
CHGAP10645 RPS2P4-201ENST00000476944 856 ntBASIC30.37■■■□□ 2.45
CHGAP10645 UNC93B4-201ENST00000505679 747 ntBASIC30.37■■■□□ 2.45
CHGAP10645 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
CHGAP10645 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC30.37■■■□□ 2.45
CHGAP10645 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC30.37■■■□□ 2.45
CHGAP10645 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CHGAP10645 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CHGAP10645 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC30.37■■■□□ 2.45
CHGAP10645 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHGAP10645 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHGAP10645 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
CHGAP10645 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHGAP10645 NFE2L3P1-201ENST00000588207 1959 ntBASIC30.36■■■□□ 2.45
CHGAP10645 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHGAP10645 PEX7-202ENST00000367756 680 ntTSL 3 BASIC30.36■■■□□ 2.45
CHGAP10645 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC30.36■■■□□ 2.45
CHGAP10645 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHGAP10645 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC30.36■■■□□ 2.45
CHGAP10645 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC30.36■■■□□ 2.45
CHGAP10645 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
CHGAP10645 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC30.36■■■□□ 2.45
CHGAP10645 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHGAP10645 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC30.35■■■□□ 2.45
CHGAP10645 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC30.35■■■□□ 2.45
CHGAP10645 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC30.35■■■□□ 2.45
CHGAP10645 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC30.35■■■□□ 2.45
CHGAP10645 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHGAP10645 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHGAP10645 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHGAP10645 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC30.35■■■□□ 2.45
CHGAP10645 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC30.34■■■□□ 2.45
CHGAP10645 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHGAP10645 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC30.34■■■□□ 2.45
CHGAP10645 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC30.34■■■□□ 2.45
CHGAP10645 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC30.34■■■□□ 2.45
CHGAP10645 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CHGAP10645 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
CHGAP10645 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC30.34■■■□□ 2.45
CHGAP10645 AC091799.1-201ENST00000422823 811 ntBASIC30.34■■■□□ 2.45
CHGAP10645 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CHGAP10645 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC30.34■■■□□ 2.45
CHGAP10645 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
CHGAP10645 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHGAP10645 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC30.34■■■□□ 2.45
CHGAP10645 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
CHGAP10645 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CHGAP10645 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHGAP10645 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHGAP10645 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHGAP10645 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHGAP10645 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
CHGAP10645 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHGAP10645 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC30.33■■■□□ 2.45
CHGAP10645 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
CHGAP10645 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHGAP10645 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHGAP10645 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHGAP10645 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC30.32■■■□□ 2.44
CHGAP10645 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms