Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRPRAP08240 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRPRAP08240 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRPRAP08240 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRPRAP08240 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRPRAP08240 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRPRAP08240 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SRPRAP08240 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.3■■□□□ 1
SRPRAP08240 SLC29A4P1-201ENST00000398760 971 ntBASIC21.3■■□□□ 1
SRPRAP08240 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SRPRAP08240 AC105036.2-201ENST00000569468 176 ntBASIC21.3■■□□□ 1
SRPRAP08240 AC142086.2-201ENST00000569753 217 ntBASIC21.3■■□□□ 1
SRPRAP08240 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
SRPRAP08240 OR10C1-204ENST00000622521 1039 ntBASIC21.3■■□□□ 1
SRPRAP08240 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.3■■□□□ 1
SRPRAP08240 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRPRAP08240 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRPRAP08240 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.3■■□□□ 1
SRPRAP08240 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.3■■□□□ 1
SRPRAP08240 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 ECEL1P1-201ENST00000373592 1742 ntBASIC21.29■■□□□ 1
SRPRAP08240 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.29■■□□□ 1
SRPRAP08240 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.29■■□□□ 1
SRPRAP08240 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.29■■□□□ 1
SRPRAP08240 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.29■■□□□ 1
SRPRAP08240 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SRPRAP08240 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.29■■□□□ 1
SRPRAP08240 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SRPRAP08240 AC069236.1-201ENST00000604339 616 ntBASIC21.29■■□□□ 1
SRPRAP08240 AL591742.1-201ENST00000604433 565 ntBASIC21.29■■□□□ 1
SRPRAP08240 AC008694.1-202ENST00000636953 945 ntBASIC21.29■■□□□ 1
SRPRAP08240 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SRPRAP08240 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SRPRAP08240 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.28■■□□□ 1
SRPRAP08240 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRPRAP08240 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRPRAP08240 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.28■■□□□ 1
SRPRAP08240 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SRPRAP08240 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SRPRAP08240 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.28■■□□□ 1
SRPRAP08240 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRPRAP08240 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SRPRAP08240 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SRPRAP08240 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRPRAP08240 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.28■■□□□ 1
SRPRAP08240 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SRPRAP08240 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SRPRAP08240 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.27■■□□□ 1
SRPRAP08240 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRPRAP08240 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.27■■□□□ 1
SRPRAP08240 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SRPRAP08240 AL512625.2-201ENST00000417533 625 ntBASIC21.27■■□□□ 1
SRPRAP08240 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SRPRAP08240 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.27■■□□□ 1
SRPRAP08240 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.27■■□□□ 1
SRPRAP08240 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.27■□□□□ 0.99
SRPRAP08240 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.26■□□□□ 0.99
SRPRAP08240 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.26■□□□□ 0.99
SRPRAP08240 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRPRAP08240 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SRPRAP08240 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SRPRAP08240 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SRPRAP08240 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.26■□□□□ 0.99
SRPRAP08240 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.26■□□□□ 0.99
SRPRAP08240 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.26■□□□□ 0.99
SRPRAP08240 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.26■□□□□ 0.99
SRPRAP08240 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRPRAP08240 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 AL117328.2-201ENST00000624617 1940 ntBASIC21.25■□□□□ 0.99
SRPRAP08240 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 C11orf96-202ENST00000528572 1834 ntBASIC21.25■□□□□ 0.99
SRPRAP08240 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SRPRAP08240 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 AC245052.3-201ENST00000450182 901 ntBASIC21.25■□□□□ 0.99
SRPRAP08240 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.25■□□□□ 0.99
SRPRAP08240 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.25■□□□□ 0.99
SRPRAP08240 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.25■□□□□ 0.99
SRPRAP08240 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
SRPRAP08240 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms