Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOBP04114 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBP04114 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOBP04114 RPS2P55-201ENST00000397318 883 ntBASIC13.31□□□□□ -0.28
APOBP04114 AC107956.1-201ENST00000494359 873 ntBASIC13.31□□□□□ -0.28
APOBP04114 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.31□□□□□ -0.28
APOBP04114 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.31□□□□□ -0.28
APOBP04114 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBP04114 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOBP04114 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBP04114 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBP04114 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBP04114 AC133561.5-201ENST00000635547 218 ntBASIC13.3□□□□□ -0.28
APOBP04114 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBP04114 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBP04114 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBP04114 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.3□□□□□ -0.28
APOBP04114 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
APOBP04114 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.3□□□□□ -0.28
APOBP04114 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBP04114 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBP04114 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBP04114 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
APOBP04114 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBP04114 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
APOBP04114 TSPY7P-201ENST00000431358 1114 ntBASIC13.3□□□□□ -0.28
APOBP04114 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBP04114 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBP04114 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.3□□□□□ -0.28
APOBP04114 LINC01124-201ENST00000409786 2117 ntBASIC13.3□□□□□ -0.28
APOBP04114 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.3□□□□□ -0.28
APOBP04114 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.3□□□□□ -0.28
APOBP04114 AC060766.5-201ENST00000590539 871 ntBASIC13.3□□□□□ -0.28
APOBP04114 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBP04114 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 AL591742.1-201ENST00000604433 565 ntBASIC13.29□□□□□ -0.28
APOBP04114 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.29□□□□□ -0.28
APOBP04114 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
APOBP04114 AC079089.2-201ENST00000531211 1277 ntBASIC13.29□□□□□ -0.28
APOBP04114 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBP04114 AC061975.6-201ENST00000579045 1553 ntBASIC13.29□□□□□ -0.28
APOBP04114 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
APOBP04114 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
APOBP04114 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
APOBP04114 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.29□□□□□ -0.28
APOBP04114 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBP04114 MTDHP1-201ENST00000605323 784 ntBASIC13.29□□□□□ -0.28
APOBP04114 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBP04114 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBP04114 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
APOBP04114 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBP04114 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOBP04114 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
APOBP04114 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APOBP04114 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
APOBP04114 AC100791.3-201ENST00000617619 330 ntBASIC13.28□□□□□ -0.28
APOBP04114 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
APOBP04114 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBP04114 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBP04114 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBP04114 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.28□□□□□ -0.28
APOBP04114 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBP04114 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBP04114 PREB-202ENST00000406567 1910 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBP04114 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBP04114 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
APOBP04114 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOBP04114 MIR4785-201ENST00000585005 73 ntBASIC13.28□□□□□ -0.28
APOBP04114 CD177P1-201ENST00000606252 935 ntBASIC13.28□□□□□ -0.28
APOBP04114 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOBP04114 AL355075.4-201ENST00000554988 638 ntBASIC13.27□□□□□ -0.28
APOBP04114 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.28
APOBP04114 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOBP04114 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOBP04114 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOBP04114 AC087499.1-201ENST00000418141 1075 ntBASIC13.27□□□□□ -0.28
APOBP04114 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.27□□□□□ -0.29
APOBP04114 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.27□□□□□ -0.29
APOBP04114 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBP04114 AL034346.1-201ENST00000568244 1277 ntBASIC13.27□□□□□ -0.29
APOBP04114 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.27□□□□□ -0.29
APOBP04114 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBP04114 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOBP04114 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.27□□□□□ -0.29
APOBP04114 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.27□□□□□ -0.29
APOBP04114 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.26□□□□□ -0.29
APOBP04114 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBP04114 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms