Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHRNA1P02708 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.02■■□□□ 1.28
CHRNA1P02708 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.02■■□□□ 1.28
CHRNA1P02708 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHRNA1P02708 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.02■■□□□ 1.28
CHRNA1P02708 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CHRNA1P02708 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.01■■□□□ 1.27
CHRNA1P02708 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CHRNA1P02708 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.01■■□□□ 1.27
CHRNA1P02708 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHRNA1P02708 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.01■■□□□ 1.27
CHRNA1P02708 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHRNA1P02708 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CHRNA1P02708 AC091799.1-201ENST00000422823 811 ntBASIC23.01■■□□□ 1.27
CHRNA1P02708 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.01■■□□□ 1.27
CHRNA1P02708 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.01■■□□□ 1.27
CHRNA1P02708 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.01■■□□□ 1.27
CHRNA1P02708 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.01■■□□□ 1.27
CHRNA1P02708 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CHRNA1P02708 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CHRNA1P02708 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 AC010542.4-201ENST00000563151 1910 ntBASIC23■■□□□ 1.27
CHRNA1P02708 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23■■□□□ 1.27
CHRNA1P02708 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 OR2A1-AS1-201ENST00000462305 773 ntBASIC23■■□□□ 1.27
CHRNA1P02708 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23■■□□□ 1.27
CHRNA1P02708 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CHRNA1P02708 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHRNA1P02708 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23■■□□□ 1.27
CHRNA1P02708 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CHRNA1P02708 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CHRNA1P02708 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.99■■□□□ 1.27
CHRNA1P02708 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.99■■□□□ 1.27
CHRNA1P02708 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CHRNA1P02708 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.99■■□□□ 1.27
CHRNA1P02708 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.99■■□□□ 1.27
CHRNA1P02708 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.99■■□□□ 1.27
CHRNA1P02708 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CHRNA1P02708 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHRNA1P02708 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHRNA1P02708 C11orf96-202ENST00000528572 1834 ntBASIC22.98■■□□□ 1.27
CHRNA1P02708 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
CHRNA1P02708 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CHRNA1P02708 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
CHRNA1P02708 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CHRNA1P02708 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CHRNA1P02708 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CHRNA1P02708 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CHRNA1P02708 ESRRAP1-201ENST00000400596 1257 ntBASIC22.98■■□□□ 1.27
CHRNA1P02708 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.98■■□□□ 1.27
CHRNA1P02708 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CHRNA1P02708 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.98■■□□□ 1.27
CHRNA1P02708 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.98■■□□□ 1.27
CHRNA1P02708 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CHRNA1P02708 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.98■■□□□ 1.27
CHRNA1P02708 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.98■■□□□ 1.27
CHRNA1P02708 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CHRNA1P02708 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CHRNA1P02708 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CHRNA1P02708 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.98■■□□□ 1.27
CHRNA1P02708 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHRNA1P02708 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.97■■□□□ 1.27
CHRNA1P02708 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.97■■□□□ 1.27
CHRNA1P02708 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHRNA1P02708 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHRNA1P02708 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CHRNA1P02708 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.97■■□□□ 1.27
CHRNA1P02708 AL355472.2-201ENST00000422958 438 ntBASIC22.97■■□□□ 1.27
CHRNA1P02708 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHRNA1P02708 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHRNA1P02708 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.97■■□□□ 1.27
CHRNA1P02708 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHRNA1P02708 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHRNA1P02708 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHRNA1P02708 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHRNA1P02708 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHRNA1P02708 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.96■■□□□ 1.27
CHRNA1P02708 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.96■■□□□ 1.27
CHRNA1P02708 AC093827.2-201ENST00000512654 315 ntBASIC22.96■■□□□ 1.27
CHRNA1P02708 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.96■■□□□ 1.27
CHRNA1P02708 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CHRNA1P02708 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.96■■□□□ 1.27
CHRNA1P02708 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.96■■□□□ 1.27
CHRNA1P02708 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHRNA1P02708 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHRNA1P02708 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.96■■□□□ 1.27
CHRNA1P02708 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHRNA1P02708 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
CHRNA1P02708 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.96■■□□□ 1.27
CHRNA1P02708 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CHRNA1P02708 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CHRNA1P02708 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms