Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TcraP01849 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TcraP01849 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.49□□□□□ -0.25
TcraP01849 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.49□□□□□ -0.25
TcraP01849 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TcraP01849 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
TcraP01849 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TcraP01849 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TcraP01849 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TcraP01849 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TcraP01849 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.48□□□□□ -0.25
TcraP01849 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TcraP01849 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
TcraP01849 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Gm7417-201ENSMUST00000192950 473 ntBASIC13.48□□□□□ -0.25
TcraP01849 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.48□□□□□ -0.25
TcraP01849 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.48□□□□□ -0.25
TcraP01849 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TcraP01849 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TcraP01849 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.48□□□□□ -0.25
TcraP01849 Fst-202ENSMUST00000223640 2612 ntBASIC13.48□□□□□ -0.25
TcraP01849 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TcraP01849 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.47□□□□□ -0.25
TcraP01849 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.47□□□□□ -0.25
TcraP01849 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.47□□□□□ -0.25
TcraP01849 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TcraP01849 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.47□□□□□ -0.25
TcraP01849 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TcraP01849 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
TcraP01849 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TcraP01849 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.46□□□□□ -0.25
TcraP01849 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TcraP01849 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.46□□□□□ -0.25
TcraP01849 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.46□□□□□ -0.25
TcraP01849 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TcraP01849 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TcraP01849 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TcraP01849 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TcraP01849 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TcraP01849 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TcraP01849 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TcraP01849 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TcraP01849 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TcraP01849 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TcraP01849 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TcraP01849 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Etf1-202ENSMUST00000180351 108 ntBASIC13.45□□□□□ -0.26
TcraP01849 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.45□□□□□ -0.26
TcraP01849 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.45□□□□□ -0.26
TcraP01849 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TcraP01849 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.45□□□□□ -0.26
TcraP01849 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms