Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-2O95096 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.44■□□□□ 0.7
NKX2-2O95096 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-2O95096 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.44■□□□□ 0.7
NKX2-2O95096 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-2O95096 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.44■□□□□ 0.7
NKX2-2O95096 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.44■□□□□ 0.7
NKX2-2O95096 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.44■□□□□ 0.7
NKX2-2O95096 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-2O95096 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-2O95096 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
NKX2-2O95096 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-2O95096 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-2O95096 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-2O95096 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-2O95096 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-2O95096 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.43■□□□□ 0.7
NKX2-2O95096 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.43■□□□□ 0.7
NKX2-2O95096 POU5F1P4-201ENST00000413175 1085 ntBASIC19.43■□□□□ 0.7
NKX2-2O95096 AC097381.1-201ENST00000429019 1296 ntBASIC19.43■□□□□ 0.7
NKX2-2O95096 AC010141.2-201ENST00000452426 721 ntBASIC19.43■□□□□ 0.7
NKX2-2O95096 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.43■□□□□ 0.7
NKX2-2O95096 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.43■□□□□ 0.7
NKX2-2O95096 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.43■□□□□ 0.7
NKX2-2O95096 AC008175.2-201ENST00000612840 297 ntBASIC19.43■□□□□ 0.7
NKX2-2O95096 AC061975.6-201ENST00000579045 1553 ntBASIC19.43■□□□□ 0.7
NKX2-2O95096 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NKX2-2O95096 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-2O95096 AP004607.4-201ENST00000530158 1459 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-2O95096 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NKX2-2O95096 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-2O95096 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.42■□□□□ 0.7
NKX2-2O95096 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-2O95096 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX2-2O95096 DUX4L2-201ENST00000561772 1275 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 AC104187.1-201ENST00000607510 612 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
NKX2-2O95096 MIR6821-201ENST00000617625 74 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 DUX4L6-201ENST00000626483 1275 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 DUX4L1-201ENST00000627662 1275 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 DUX4L8-201ENST00000629013 1275 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 DUX4L3-201ENST00000630187 1275 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 DUX4L7-201ENST00000630678 1275 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 DUX4L5-201ENST00000630834 1275 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.42■□□□□ 0.7
NKX2-2O95096 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX2-2O95096 AC019069.1-201ENST00000610008 1333 ntBASIC19.42■□□□□ 0.7
NKX2-2O95096 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.42■□□□□ 0.7
NKX2-2O95096 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.42■□□□□ 0.7
NKX2-2O95096 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-2O95096 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-2O95096 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NKX2-2O95096 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.41■□□□□ 0.7
NKX2-2O95096 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-2O95096 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NKX2-2O95096 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-2O95096 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-2O95096 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.41■□□□□ 0.7
NKX2-2O95096 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-2O95096 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX2-2O95096 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.41■□□□□ 0.7
NKX2-2O95096 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.41■□□□□ 0.7
NKX2-2O95096 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-2O95096 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-2O95096 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-2O95096 AC004854.2-201ENST00000608450 1441 ntBASIC19.41■□□□□ 0.7
NKX2-2O95096 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-2O95096 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX2-2O95096 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX2-2O95096 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-2O95096 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-2O95096 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.4■□□□□ 0.7
NKX2-2O95096 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-2O95096 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NKX2-2O95096 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-2O95096 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-2O95096 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.4■□□□□ 0.7
NKX2-2O95096 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NKX2-2O95096 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-2O95096 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.4■□□□□ 0.7
NKX2-2O95096 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-2O95096 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-2O95096 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NKX2-2O95096 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-2O95096 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-2O95096 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NKX2-2O95096 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NKX2-2O95096 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NKX2-2O95096 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.39■□□□□ 0.69
NKX2-2O95096 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.39■□□□□ 0.69
NKX2-2O95096 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-2O95096 AP001160.3-201ENST00000601484 763 ntBASIC19.39■□□□□ 0.69
NKX2-2O95096 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-2O95096 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-2O95096 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NKX2-2O95096 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-2O95096 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-2O95096 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-2O95096 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms