Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SNCGO76070 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.18□□□□□ -0.14
SNCGO76070 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
SNCGO76070 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 AC021231.2-201ENST00000594613 730 ntBASIC14.18□□□□□ -0.14
SNCGO76070 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SNCGO76070 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.18□□□□□ -0.14
SNCGO76070 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
SNCGO76070 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SNCGO76070 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SNCGO76070 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNCGO76070 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 CD37-213ENST00000598095 1598 ntTSL 2 BASIC14.17□□□□□ -0.14
SNCGO76070 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.17□□□□□ -0.14
SNCGO76070 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.17□□□□□ -0.14
SNCGO76070 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SNCGO76070 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SNCGO76070 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SNCGO76070 DUX4L13-201ENST00000554103 1267 ntBASIC14.17□□□□□ -0.14
SNCGO76070 DUX4L15-201ENST00000611059 1267 ntBASIC14.17□□□□□ -0.14
SNCGO76070 DUX4L23-201ENST00000615195 1269 ntBASIC14.17□□□□□ -0.14
SNCGO76070 DUX4L24-201ENST00000617576 1269 ntBASIC14.17□□□□□ -0.14
SNCGO76070 DUX4L22-201ENST00000618238 1269 ntBASIC14.17□□□□□ -0.14
SNCGO76070 DUX4L20-201ENST00000619712 1269 ntBASIC14.17□□□□□ -0.14
SNCGO76070 DUX4L21-201ENST00000622058 1269 ntBASIC14.17□□□□□ -0.14
SNCGO76070 DUX4L10-201ENST00000622460 1267 ntBASIC14.17□□□□□ -0.14
SNCGO76070 DUX4L25-201ENST00000624915 1269 ntBASIC14.17□□□□□ -0.14
SNCGO76070 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.17□□□□□ -0.14
SNCGO76070 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
SNCGO76070 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC14.17□□□□□ -0.14
SNCGO76070 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNCGO76070 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCGO76070 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
SNCGO76070 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 AL022069.1-201ENST00000568025 1636 ntBASIC14.16□□□□□ -0.14
SNCGO76070 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCGO76070 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SNCGO76070 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SNCGO76070 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.16□□□□□ -0.14
SNCGO76070 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SNCGO76070 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
SNCGO76070 LINC01971-201ENST00000617888 1048 ntBASIC14.16□□□□□ -0.14
SNCGO76070 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCGO76070 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC14.16□□□□□ -0.14
SNCGO76070 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SNCGO76070 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCGO76070 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNCGO76070 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCGO76070 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.15□□□□□ -0.14
SNCGO76070 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCGO76070 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNCGO76070 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNCGO76070 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.15□□□□□ -0.14
SNCGO76070 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SNCGO76070 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNCGO76070 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SNCGO76070 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
SNCGO76070 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
SNCGO76070 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCGO76070 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCGO76070 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCGO76070 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.15□□□□□ -0.14
SNCGO76070 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCGO76070 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SNCGO76070 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.15□□□□□ -0.14
SNCGO76070 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SNCGO76070 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms