Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM1O00151 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.93■□□□□ 0.78
PDLIM1O00151 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM1O00151 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM1O00151 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM1O00151 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM1O00151 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PDLIM1O00151 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.93■□□□□ 0.78
PDLIM1O00151 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM1O00151 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDLIM1O00151 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM1O00151 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PDLIM1O00151 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM1O00151 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM1O00151 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM1O00151 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDLIM1O00151 AC008406.3-201ENST00000620001 1374 ntBASIC19.93■□□□□ 0.78
PDLIM1O00151 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.93■□□□□ 0.78
PDLIM1O00151 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM1O00151 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM1O00151 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
PDLIM1O00151 AC009102.2-201ENST00000606772 1639 ntBASIC19.92■□□□□ 0.78
PDLIM1O00151 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.92■□□□□ 0.78
PDLIM1O00151 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDLIM1O00151 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PDLIM1O00151 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PDLIM1O00151 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
PDLIM1O00151 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.92■□□□□ 0.78
PDLIM1O00151 PCDHAC2-203ENST00000615316 3011 ntBASIC19.92■□□□□ 0.78
PDLIM1O00151 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM1O00151 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDLIM1O00151 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM1O00151 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM1O00151 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM1O00151 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PDLIM1O00151 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM1O00151 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM1O00151 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM1O00151 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM1O00151 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.9■□□□□ 0.78
PDLIM1O00151 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDLIM1O00151 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PDLIM1O00151 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM1O00151 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PDLIM1O00151 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM1O00151 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PDLIM1O00151 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM1O00151 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PDLIM1O00151 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM1O00151 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
PDLIM1O00151 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PDLIM1O00151 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PDLIM1O00151 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM1O00151 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM1O00151 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM1O00151 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
PDLIM1O00151 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM1O00151 AL136116.3-201ENST00000402907 1138 ntBASIC19.89■□□□□ 0.77
PDLIM1O00151 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.89■□□□□ 0.77
PDLIM1O00151 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.89■□□□□ 0.77
PDLIM1O00151 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.89■□□□□ 0.77
PDLIM1O00151 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
PDLIM1O00151 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM1O00151 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM1O00151 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PDLIM1O00151 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDLIM1O00151 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms