Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
TRBV10-1A0A0K0K1A3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV10-1A0A0K0K1A3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV10-1A0A0K0K1A3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AC131212.1-201ENST00000613771 668 ntBASIC14.83□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AC105233.4-201ENST00000642045 216 ntBASIC14.83□□□□□ -0.04
TRBV10-1A0A0K0K1A3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV10-1A0A0K0K1A3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV10-1A0A0K0K1A3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 EDA-201ENST00000338901 1233 ntBASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AC008764.7-201ENST00000593779 1081 ntBASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AC008406.3-201ENST00000620001 1374 ntBASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AC055733.4-201ENST00000638462 1354 ntBASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV10-1A0A0K0K1A3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AC099791.1-201ENST00000416440 715 ntBASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 BX005040.4-201ENST00000637145 1518 ntBASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AC005224.4-201ENST00000583262 1652 ntBASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV10-1A0A0K0K1A3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 TSPY26P-201ENST00000476365 1326 ntBASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PBX2P1-201ENST00000493219 1291 ntBASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 LINC01521-201ENST00000504184 1943 ntBASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms