Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
DDX49Q9Y6V7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
DDX49Q9Y6V7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 AF106564.1-201ENST00000607058 2553 ntBASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX49Q9Y6V7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
DDX49Q9Y6V7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 AC123595.1-201ENST00000440769 1046 ntBASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 AC090192.1-201ENST00000517740 490 ntBASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 KRT18P61-201ENST00000585825 1298 ntBASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 AL354811.1-201ENST00000610286 706 ntBASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 AL121603.2-201ENST00000557373 2117 ntBASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX49Q9Y6V7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.14■■□□□ 1.62
DDX49Q9Y6V7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX49Q9Y6V7 Z98882.1-201ENST00000622160 2253 ntBASIC25.14■■□□□ 1.62
DDX49Q9Y6V7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.14■■□□□ 1.62
DDX49Q9Y6V7 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.14■■□□□ 1.62
DDX49Q9Y6V7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
DDX49Q9Y6V7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
DDX49Q9Y6V7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.14■■□□□ 1.62
DDX49Q9Y6V7 RARRES2P11-201ENST00000635158 484 ntBASIC25.14■■□□□ 1.62
DDX49Q9Y6V7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX49Q9Y6V7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX49Q9Y6V7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
DDX49Q9Y6V7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.14■■□□□ 1.61
DDX49Q9Y6V7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX49Q9Y6V7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
DDX49Q9Y6V7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 KRT18P14-201ENST00000534205 1250 ntBASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC25.13■■□□□ 1.61
DDX49Q9Y6V7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 AC092667.1-201ENST00000434301 2586 ntBASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms