Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNMT3AQ9Y6K1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 EP400NL-214ENST00000641289 2402 ntBASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 UBE2DNL-204ENST00000602536 740 ntBASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 BID-214ENST00000617586 542 ntTSL 5 BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 MYCNOS-205ENST00000641950 531 ntBASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNMT3AQ9Y6K1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.66■□□□□ 0.9
DNMT3AQ9Y6K1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 AC004911.1-201ENST00000416316 871 ntBASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 SLC7A5P2-201ENST00000553010 536 ntBASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNMT3AQ9Y6K1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
DNMT3AQ9Y6K1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
DNMT3AQ9Y6K1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
DNMT3AQ9Y6K1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
DNMT3AQ9Y6K1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 AC011767.1-201ENST00000617410 1153 ntBASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DNMT3AQ9Y6K1 AC061975.6-201ENST00000579045 1553 ntBASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 AC244015.2-201ENST00000616358 1861 ntBASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms