Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CDC42BPBQ9Y5S2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
CDC42BPBQ9Y5S2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
CDC42BPBQ9Y5S2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC32.26■■■□□ 2.76
CDC42BPBQ9Y5S2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CDC42BPBQ9Y5S2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.76
CDC42BPBQ9Y5S2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC32.26■■■□□ 2.76
CDC42BPBQ9Y5S2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.76
CDC42BPBQ9Y5S2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CDC42BPBQ9Y5S2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CDC42BPBQ9Y5S2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CDC42BPBQ9Y5S2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC32.26■■■□□ 2.75
CDC42BPBQ9Y5S2 AL359736.2-201ENST00000621992 437 ntBASIC32.26■■■□□ 2.75
CDC42BPBQ9Y5S2 AP006294.2-201ENST00000641667 209 ntBASIC32.26■■■□□ 2.75
CDC42BPBQ9Y5S2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CDC42BPBQ9Y5S2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CDC42BPBQ9Y5S2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
CDC42BPBQ9Y5S2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC32.25■■■□□ 2.75
CDC42BPBQ9Y5S2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CDC42BPBQ9Y5S2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CDC42BPBQ9Y5S2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
CDC42BPBQ9Y5S2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
CDC42BPBQ9Y5S2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
CDC42BPBQ9Y5S2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
CDC42BPBQ9Y5S2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC32.24■■■□□ 2.75
CDC42BPBQ9Y5S2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC32.24■■■□□ 2.75
CDC42BPBQ9Y5S2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC32.23■■■□□ 2.75
CDC42BPBQ9Y5S2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CDC42BPBQ9Y5S2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC32.23■■■□□ 2.75
CDC42BPBQ9Y5S2 CYP2T3P-201ENST00000601990 817 ntBASIC32.23■■■□□ 2.75
CDC42BPBQ9Y5S2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CDC42BPBQ9Y5S2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
CDC42BPBQ9Y5S2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC32.23■■■□□ 2.75
CDC42BPBQ9Y5S2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CDC42BPBQ9Y5S2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC32.23■■■□□ 2.75
CDC42BPBQ9Y5S2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CDC42BPBQ9Y5S2 AC003102.1-202ENST00000563394 1796 ntBASIC32.22■■■□□ 2.75
CDC42BPBQ9Y5S2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
CDC42BPBQ9Y5S2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CDC42BPBQ9Y5S2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC32.22■■■□□ 2.75
CDC42BPBQ9Y5S2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
CDC42BPBQ9Y5S2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC32.21■■■□□ 2.75
CDC42BPBQ9Y5S2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CDC42BPBQ9Y5S2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CDC42BPBQ9Y5S2 FAM21FP-204ENST00000608637 956 ntBASIC32.21■■■□□ 2.75
CDC42BPBQ9Y5S2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC32.21■■■□□ 2.75
CDC42BPBQ9Y5S2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CDC42BPBQ9Y5S2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CDC42BPBQ9Y5S2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CDC42BPBQ9Y5S2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC32.2■■■□□ 2.75
CDC42BPBQ9Y5S2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC32.2■■■□□ 2.75
CDC42BPBQ9Y5S2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CDC42BPBQ9Y5S2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CDC42BPBQ9Y5S2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC32.2■■■□□ 2.75
CDC42BPBQ9Y5S2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC32.2■■■□□ 2.74
CDC42BPBQ9Y5S2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC32.2■■■□□ 2.74
CDC42BPBQ9Y5S2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC32.2■■■□□ 2.74
CDC42BPBQ9Y5S2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.74
CDC42BPBQ9Y5S2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC32.19■■■□□ 2.74
CDC42BPBQ9Y5S2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CDC42BPBQ9Y5S2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDC42BPBQ9Y5S2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CDC42BPBQ9Y5S2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CDC42BPBQ9Y5S2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDC42BPBQ9Y5S2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CDC42BPBQ9Y5S2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC32.19■■■□□ 2.74
CDC42BPBQ9Y5S2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CDC42BPBQ9Y5S2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC32.18■■■□□ 2.74
CDC42BPBQ9Y5S2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CDC42BPBQ9Y5S2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC32.18■■■□□ 2.74
CDC42BPBQ9Y5S2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC32.18■■■□□ 2.74
CDC42BPBQ9Y5S2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC32.18■■■□□ 2.74
CDC42BPBQ9Y5S2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 NME6-213ENST00000451657 871 ntTSL 2 BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 RPS2P4-201ENST00000476944 856 ntBASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 AC008550.1-201ENST00000511500 884 ntBASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CDC42BPBQ9Y5S2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
CDC42BPBQ9Y5S2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
CDC42BPBQ9Y5S2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CDC42BPBQ9Y5S2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
CDC42BPBQ9Y5S2 PNMA6B-201ENST00000538162 1200 ntBASIC32.16■■■□□ 2.74
CDC42BPBQ9Y5S2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC32.16■■■□□ 2.74
CDC42BPBQ9Y5S2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
CDC42BPBQ9Y5S2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CDC42BPBQ9Y5S2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CDC42BPBQ9Y5S2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC32.15■■■□□ 2.74
CDC42BPBQ9Y5S2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC32.15■■■□□ 2.74
CDC42BPBQ9Y5S2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC32.15■■■□□ 2.74
CDC42BPBQ9Y5S2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CDC42BPBQ9Y5S2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
CDC42BPBQ9Y5S2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC32.15■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms