Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EXOSC1Q9Y3B2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EXOSC1Q9Y3B2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
EXOSC1Q9Y3B2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EXOSC1Q9Y3B2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
EXOSC1Q9Y3B2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EXOSC1Q9Y3B2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EXOSC1Q9Y3B2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EXOSC1Q9Y3B2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
EXOSC1Q9Y3B2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EXOSC1Q9Y3B2 AC073314.1-201ENST00000568729 2216 ntBASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 OR2I1P-207ENST00000453522 948 ntBASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXOSC1Q9Y3B2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 MIR4787-201ENST00000607364 84 ntBASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 AC007952.6-201ENST00000573168 2673 ntBASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 AC003957.1-201ENST00000625108 2673 ntBASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXOSC1Q9Y3B2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 AC006455.2-201ENST00000429931 906 ntBASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms