Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ZC3H4Q9UPT8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.75■■□□□ 1.71
ZC3H4Q9UPT8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZC3H4Q9UPT8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZC3H4Q9UPT8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.75■■□□□ 1.71
ZC3H4Q9UPT8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ZC3H4Q9UPT8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
ZC3H4Q9UPT8 AC100791.3-201ENST00000617619 330 ntBASIC25.75■■□□□ 1.71
ZC3H4Q9UPT8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZC3H4Q9UPT8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZC3H4Q9UPT8 KRT17P1-201ENST00000399211 1546 ntBASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 AC012306.2-201ENST00000609350 630 ntBASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
ZC3H4Q9UPT8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
ZC3H4Q9UPT8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZC3H4Q9UPT8 RCN1P1-201ENST00000400413 996 ntBASIC25.73■■□□□ 1.71
ZC3H4Q9UPT8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.73■■□□□ 1.71
ZC3H4Q9UPT8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZC3H4Q9UPT8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
ZC3H4Q9UPT8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.73■■□□□ 1.71
ZC3H4Q9UPT8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
ZC3H4Q9UPT8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ZC3H4Q9UPT8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ZC3H4Q9UPT8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.72■■□□□ 1.71
ZC3H4Q9UPT8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
ZC3H4Q9UPT8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
ZC3H4Q9UPT8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.72■■□□□ 1.71
ZC3H4Q9UPT8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
ZC3H4Q9UPT8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.72■■□□□ 1.71
ZC3H4Q9UPT8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 RPS2P55-201ENST00000397318 883 ntBASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 AC107956.1-201ENST00000494359 873 ntBASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 AC133561.5-201ENST00000635547 218 ntBASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.71■■□□□ 1.71
ZC3H4Q9UPT8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
ZC3H4Q9UPT8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.7■■□□□ 1.71
ZC3H4Q9UPT8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
ZC3H4Q9UPT8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.7■■□□□ 1.71
ZC3H4Q9UPT8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.7■■□□□ 1.71
ZC3H4Q9UPT8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.7■■□□□ 1.71
ZC3H4Q9UPT8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.7■■□□□ 1.71
ZC3H4Q9UPT8 AL445228.2-201ENST00000605589 952 ntBASIC25.7■■□□□ 1.71
ZC3H4Q9UPT8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ZC3H4Q9UPT8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.7■■□□□ 1.7
ZC3H4Q9UPT8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H4Q9UPT8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H4Q9UPT8 AC087499.1-201ENST00000418141 1075 ntBASIC25.69■■□□□ 1.7
ZC3H4Q9UPT8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H4Q9UPT8 AC233263.1-201ENST00000578059 224 ntBASIC25.69■■□□□ 1.7
ZC3H4Q9UPT8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H4Q9UPT8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H4Q9UPT8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H4Q9UPT8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 AC092368.3-202ENST00000574180 1591 ntBASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 FAM21FP-204ENST00000608637 956 ntBASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
ZC3H4Q9UPT8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H4Q9UPT8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
ZC3H4Q9UPT8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC25.67■■□□□ 1.7
ZC3H4Q9UPT8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H4Q9UPT8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H4Q9UPT8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H4Q9UPT8 AP001412.1-201ENST00000608405 714 ntBASIC25.67■■□□□ 1.7
ZC3H4Q9UPT8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
ZC3H4Q9UPT8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms