Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SDHAF3Q9NRP4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.33■□□□□ 0.68
SDHAF3Q9NRP4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.33■□□□□ 0.68
SDHAF3Q9NRP4 AC004854.2-201ENST00000608450 1441 ntBASIC19.33■□□□□ 0.68
SDHAF3Q9NRP4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 AC138907.5-202ENST00000569484 235 ntBASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 AC104187.1-201ENST00000607510 612 ntBASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.32■□□□□ 0.68
SDHAF3Q9NRP4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 AC120498.10-201ENST00000621827 505 ntBASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAF3Q9NRP4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 POU5F1P4-201ENST00000413175 1085 ntBASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAF3Q9NRP4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 AP001160.3-201ENST00000601484 763 ntBASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAF3Q9NRP4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 AC010141.2-201ENST00000452426 721 ntBASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 KRT18P20-201ENST00000548986 1279 ntBASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms