Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 MIR4466-201ENST00000606121 54 ntBASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCNB1IP1Q9NPC3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNB1IP1Q9NPC3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCNB1IP1Q9NPC3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCNB1IP1Q9NPC3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.39■□□□□ 0.7
CCNB1IP1Q9NPC3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.39■□□□□ 0.7
CCNB1IP1Q9NPC3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 AL136116.3-201ENST00000402907 1138 ntBASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 AC004687.1-201ENST00000579003 1625 ntBASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNB1IP1Q9NPC3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 AC006455.2-201ENST00000429931 906 ntBASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 pRNA.6-201ENST00000610482 90 ntBASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 pRNA.5-201ENST00000612139 90 ntBASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 pRNA.11-201ENST00000618423 90 ntBASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 pRNA.13-201ENST00000619112 90 ntBASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 AC008406.3-201ENST00000620001 1374 ntBASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.38■□□□□ 0.69
CCNB1IP1Q9NPC3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNB1IP1Q9NPC3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCNB1IP1Q9NPC3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.37■□□□□ 0.69
CCNB1IP1Q9NPC3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNB1IP1Q9NPC3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNB1IP1Q9NPC3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNB1IP1Q9NPC3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms