Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.5□□□□□ -0.09
Cotl1Q9CQI6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Gm7417-201ENSMUST00000192950 473 ntBASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cotl1Q9CQI6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cotl1Q9CQI6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Mir6236-201ENSMUST00000184437 123 ntBASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cotl1Q9CQI6 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cotl1Q9CQI6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms