Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 GUSBP6-202ENST00000438529 1198 ntBASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
RPAP1Q9BWH6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 FBXW4P1-201ENST00000426721 2239 ntBASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 AL121832.2-201ENST00000610979 668 ntBASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RPAP1Q9BWH6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 SLC7A5P2-201ENST00000553010 536 ntBASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RPAP1Q9BWH6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.65■■□□□ 1.7
RPAP1Q9BWH6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
RPAP1Q9BWH6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RPAP1Q9BWH6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
RPAP1Q9BWH6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RPAP1Q9BWH6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
RPAP1Q9BWH6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RPAP1Q9BWH6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
RPAP1Q9BWH6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.64■■□□□ 1.69
RPAP1Q9BWH6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.64■■□□□ 1.69
RPAP1Q9BWH6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RPAP1Q9BWH6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.64■■□□□ 1.69
RPAP1Q9BWH6 AL137060.1-201ENST00000618151 2648 ntBASIC25.64■■□□□ 1.69
RPAP1Q9BWH6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RPAP1Q9BWH6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 TSPY6P-201ENST00000448518 926 ntBASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.63■■□□□ 1.69
RPAP1Q9BWH6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.62■■□□□ 1.69
RPAP1Q9BWH6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RPAP1Q9BWH6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
RPAP1Q9BWH6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RPAP1Q9BWH6 AP001160.3-201ENST00000601484 763 ntBASIC25.62■■□□□ 1.69
RPAP1Q9BWH6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RPAP1Q9BWH6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms