Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS4Q9BT78 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS4Q9BT78 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS4Q9BT78 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.26■□□□□ 0.67
COPS4Q9BT78 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS4Q9BT78 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.26■□□□□ 0.67
COPS4Q9BT78 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.26■□□□□ 0.67
COPS4Q9BT78 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS4Q9BT78 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COPS4Q9BT78 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS4Q9BT78 AL356740.2-201ENST00000601559 647 ntBASIC19.26■□□□□ 0.67
COPS4Q9BT78 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS4Q9BT78 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.26■□□□□ 0.67
COPS4Q9BT78 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COPS4Q9BT78 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.26■□□□□ 0.67
COPS4Q9BT78 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COPS4Q9BT78 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS4Q9BT78 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS4Q9BT78 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.25■□□□□ 0.67
COPS4Q9BT78 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS4Q9BT78 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
COPS4Q9BT78 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.25■□□□□ 0.67
COPS4Q9BT78 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COPS4Q9BT78 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS4Q9BT78 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.25■□□□□ 0.67
COPS4Q9BT78 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.25■□□□□ 0.67
COPS4Q9BT78 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.25■□□□□ 0.67
COPS4Q9BT78 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COPS4Q9BT78 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS4Q9BT78 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
COPS4Q9BT78 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS4Q9BT78 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS4Q9BT78 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COPS4Q9BT78 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COPS4Q9BT78 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.24■□□□□ 0.67
COPS4Q9BT78 GABARAPL3-202ENST00000624044 1851 ntBASIC19.24■□□□□ 0.67
COPS4Q9BT78 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPS4Q9BT78 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS4Q9BT78 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS4Q9BT78 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPS4Q9BT78 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.24■□□□□ 0.67
COPS4Q9BT78 AC241377.3-202ENST00000626088 1088 ntBASIC19.24■□□□□ 0.67
COPS4Q9BT78 AC241585.3-202ENST00000628937 1088 ntBASIC19.24■□□□□ 0.67
COPS4Q9BT78 AC245100.8-202ENST00000629247 1058 ntBASIC19.24■□□□□ 0.67
COPS4Q9BT78 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS4Q9BT78 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS4Q9BT78 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COPS4Q9BT78 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.24■□□□□ 0.67
COPS4Q9BT78 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS4Q9BT78 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.24■□□□□ 0.67
COPS4Q9BT78 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.24■□□□□ 0.67
COPS4Q9BT78 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COPS4Q9BT78 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS4Q9BT78 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS4Q9BT78 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.23■□□□□ 0.67
COPS4Q9BT78 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS4Q9BT78 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPS4Q9BT78 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
COPS4Q9BT78 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
COPS4Q9BT78 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COPS4Q9BT78 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS4Q9BT78 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS4Q9BT78 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS4Q9BT78 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.23■□□□□ 0.67
COPS4Q9BT78 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS4Q9BT78 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS4Q9BT78 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS4Q9BT78 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPS4Q9BT78 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS4Q9BT78 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.22■□□□□ 0.67
COPS4Q9BT78 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS4Q9BT78 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS4Q9BT78 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS4Q9BT78 AC079089.2-201ENST00000531211 1277 ntBASIC19.22■□□□□ 0.67
COPS4Q9BT78 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS4Q9BT78 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS4Q9BT78 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS4Q9BT78 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPS4Q9BT78 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS4Q9BT78 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS4Q9BT78 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS4Q9BT78 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COPS4Q9BT78 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS4Q9BT78 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS4Q9BT78 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS4Q9BT78 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS4Q9BT78 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.21■□□□□ 0.67
COPS4Q9BT78 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS4Q9BT78 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.21■□□□□ 0.67
COPS4Q9BT78 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.21■□□□□ 0.67
COPS4Q9BT78 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.21■□□□□ 0.67
COPS4Q9BT78 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
COPS4Q9BT78 AP005212.1-201ENST00000581547 1997 ntBASIC19.21■□□□□ 0.67
COPS4Q9BT78 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS4Q9BT78 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPS4Q9BT78 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS4Q9BT78 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms