Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 ENV10YLR065C 546 nt2.18□□□□□ -2.06
ATG40Q99325 YLR365WYLR365W 333 nt2.18□□□□□ -2.06
ATG40Q99325 YBL028CYBL028C 321 nt2.18□□□□□ -2.06
ATG40Q99325 YMR194C-AYMR194C-A 225 nt2.18□□□□□ -2.06
ATG40Q99325 YNL184CYNL184C 327 nt2.18□□□□□ -2.06
ATG40Q99325 TRM112YNR046W 408 nt2.18□□□□□ -2.06
ATG40Q99325 RPS10AYOR293W 318 nt2.18□□□□□ -2.06
ATG40Q99325 snR34snR34 203 nt2.18□□□□□ -2.06
ATG40Q99325 HAA1YPR008W 2085 nt2.18□□□□□ -2.06
ATG40Q99325 AYT1YLL063C 1425 nt2.17□□□□□ -2.06
ATG40Q99325 ERP3YDL018C 678 nt2.17□□□□□ -2.06
ATG40Q99325 YDR290WYDR290W 330 nt2.17□□□□□ -2.06
ATG40Q99325 YGR064WYGR064W 369 nt2.17□□□□□ -2.06
ATG40Q99325 SAY1YGR263C 1275 nt2.17□□□□□ -2.06
ATG40Q99325 SDO1YLR022C 753 nt2.17□□□□□ -2.06
ATG40Q99325 USB1YLR132C 873 nt2.17□□□□□ -2.06
ATG40Q99325 YML047W-AYML047W-A 366 nt2.17□□□□□ -2.06
ATG40Q99325 ATP11YNL315C 957 nt2.17□□□□□ -2.06
ATG40Q99325 ITT1YML068W 1395 nt2.17□□□□□ -2.06
ATG40Q99325 PKP2YGL059W 1476 nt2.17□□□□□ -2.06
ATG40Q99325 YJL132WYJL132W 2253 nt2.17□□□□□ -2.06
ATG40Q99325 REG1YDR028C 3045 nt2.17□□□□□ -2.06
ATG40Q99325 DIA2YOR080W 2199 nt2.16□□□□□ -2.06
ATG40Q99325 NET1YJL076W 3570 nt2.16□□□□□ -2.06
ATG40Q99325 SWR1YDR334W 4545 nt2.16□□□□□ -2.06
ATG40Q99325 TSC13YDL015C 933 nt2.16□□□□□ -2.06
ATG40Q99325 FIN1YDR130C 876 nt2.16□□□□□ -2.06
ATG40Q99325 HYP2YEL034W 474 nt2.16□□□□□ -2.06
ATG40Q99325 NSA2YER126C 786 nt2.16□□□□□ -2.06
ATG40Q99325 EFG1YGR271C-A 702 nt2.16□□□□□ -2.06
ATG40Q99325 YHL045WYHL045W 348 nt2.16□□□□□ -2.06
ATG40Q99325 PCL7YIL050W 858 nt2.16□□□□□ -2.06
ATG40Q99325 AAR2YBL074C 1068 nt2.16□□□□□ -2.06
ATG40Q99325 YNL162W-AYNL162W-A 219 nt2.16□□□□□ -2.06
ATG40Q99325 YNR062CYNR062C 984 nt2.16□□□□□ -2.06
ATG40Q99325 snR11snR11 258 nt2.16□□□□□ -2.06
ATG40Q99325 YOR062CYOR062C 807 nt2.16□□□□□ -2.06
ATG40Q99325 POS5YPL188W 1245 nt2.16□□□□□ -2.06
ATG40Q99325 YPR074W-AYPR074W-A 171 nt2.16□□□□□ -2.06
ATG40Q99325 SPF1YEL031W 3648 nt2.16□□□□□ -2.06
ATG40Q99325 PDC2YDR081C 2778 nt2.16□□□□□ -2.06
ATG40Q99325 RSE1YML049C 4086 nt2.16□□□□□ -2.06
ATG40Q99325 YKR078WYKR078W 1758 nt2.15□□□□□ -2.06
ATG40Q99325 CIK1YMR198W 1785 nt2.15□□□□□ -2.06
ATG40Q99325 YML096WYML096W 1578 nt2.15□□□□□ -2.06
ATG40Q99325 JIP5YPR169W 1479 nt2.15□□□□□ -2.06
ATG40Q99325 YGR190CYGR190C 366 nt2.15□□□□□ -2.07
ATG40Q99325 RNR2YJL026W 1200 nt2.15□□□□□ -2.07
ATG40Q99325 DID4YKL002W 699 nt2.15□□□□□ -2.07
ATG40Q99325 REC102YLR329W 795 nt2.15□□□□□ -2.07
ATG40Q99325 YLR347W-AYLR347W-A 141 nt2.15□□□□□ -2.07
ATG40Q99325 YNL109WYNL109W 546 nt2.15□□□□□ -2.07
ATG40Q99325 TEX1YNL253W 1269 nt2.15□□□□□ -2.07
ATG40Q99325 MPP6YNR024W 561 nt2.15□□□□□ -2.07
ATG40Q99325 YOL024WYOL024W 519 nt2.15□□□□□ -2.07
ATG40Q99325 YPL071CYPL071C 471 nt2.15□□□□□ -2.07
ATG40Q99325 GPI2YPL076W 843 nt2.15□□□□□ -2.07
ATG40Q99325 YPL276WYPL276W 438 nt2.15□□□□□ -2.07
ATG40Q99325 TPO5YKL174C 1857 nt2.15□□□□□ -2.07
ATG40Q99325 PDR11YIL013C 4236 nt2.15□□□□□ -2.07
ATG40Q99325 VPS3YDR495C 3036 nt2.15□□□□□ -2.07
ATG40Q99325 SPH1YLR313C 1593 nt2.15□□□□□ -2.07
ATG40Q99325 TOR1YJR066W 7413 nt2.14□□□□□ -2.07
ATG40Q99325 KEL2YGR238C 2649 nt2.14□□□□□ -2.07
ATG40Q99325 YOL098CYOL098C 3114 nt2.14□□□□□ -2.07
ATG40Q99325 YER079C-AYER079C-A 339 nt2.14□□□□□ -2.07
ATG40Q99325 ISC10YER180C 804 nt2.14□□□□□ -2.07
ATG40Q99325 MST27YGL051W 705 nt2.14□□□□□ -2.07
ATG40Q99325 YIL024CYIL024C 570 nt2.14□□□□□ -2.07
ATG40Q99325 tW(CCA)G1tW(CCA)G1 72 nt2.14□□□□□ -2.07
ATG40Q99325 tW(CCA)G2tW(CCA)G2 72 nt2.14□□□□□ -2.07
ATG40Q99325 tW(CCA)JtW(CCA)J 72 nt2.14□□□□□ -2.07
ATG40Q99325 tW(CCA)KtW(CCA)K 72 nt2.14□□□□□ -2.07
ATG40Q99325 tW(CCA)MtW(CCA)M 72 nt2.14□□□□□ -2.07
ATG40Q99325 tW(CCA)PtW(CCA)P 72 nt2.14□□□□□ -2.07
ATG40Q99325 MST28YAR033W 705 nt2.14□□□□□ -2.07
ATG40Q99325 SYC1YOR179C 567 nt2.14□□□□□ -2.07
ATG40Q99325 YPR027CYPR027C 834 nt2.14□□□□□ -2.07
ATG40Q99325 HBT1YDL223C 3141 nt2.14□□□□□ -2.07
ATG40Q99325 YCG1YDR325W 3108 nt2.14□□□□□ -2.07
ATG40Q99325 ARP8YOR141C 2646 nt2.14□□□□□ -2.07
ATG40Q99325 SKP2YNL311C 2292 nt2.14□□□□□ -2.07
ATG40Q99325 TOM70YNL121C 1854 nt2.14□□□□□ -2.07
ATG40Q99325 PDR1YGL013C 3207 nt2.13□□□□□ -2.07
ATG40Q99325 ICR1ICR1 3199 nt2.13□□□□□ -2.07
ATG40Q99325 PTP3YER075C 2787 nt2.13□□□□□ -2.07
ATG40Q99325 MTL1YGR023W 1656 nt2.13□□□□□ -2.07
ATG40Q99325 PEX6YNL329C 3093 nt2.13□□□□□ -2.07
ATG40Q99325 ARF1YDL192W 546 nt2.13□□□□□ -2.07
ATG40Q99325 YDR222WYDR222W 1248 nt2.13□□□□□ -2.07
ATG40Q99325 RMD5YDR255C 1266 nt2.13□□□□□ -2.07
ATG40Q99325 SMX2YFL017W-A 234 nt2.13□□□□□ -2.07
ATG40Q99325 POP6YGR030C 477 nt2.13□□□□□ -2.07
ATG40Q99325 YGR073CYGR073C 372 nt2.13□□□□□ -2.07
ATG40Q99325 YGR160WYGR160W 612 nt2.13□□□□□ -2.07
ATG40Q99325 YHR213WYHR213W 597 nt2.13□□□□□ -2.07
ATG40Q99325 YAR062WYAR062W 597 nt2.13□□□□□ -2.07
ATG40Q99325 RDN58-1RDN58-1 158 nt2.13□□□□□ -2.07
ATG40Q99325 RDN58-2RDN58-2 158 nt2.13□□□□□ -2.07
ATG40Q99325 YNL035CYNL035C 1170 nt2.13□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms