Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CLCC1Q96S66 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLCC1Q96S66 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCC1Q96S66 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCC1Q96S66 AL512631.2-201ENST00000604634 923 ntBASIC17.63■□□□□ 0.41
CLCC1Q96S66 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCC1Q96S66 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCC1Q96S66 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 AC005229.4-201ENST00000610085 2198 ntBASIC17.62■□□□□ 0.41
CLCC1Q96S66 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 pRNA.6-201ENST00000610482 90 ntBASIC17.62■□□□□ 0.41
CLCC1Q96S66 pRNA.5-201ENST00000612139 90 ntBASIC17.62■□□□□ 0.41
CLCC1Q96S66 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 pRNA.11-201ENST00000618423 90 ntBASIC17.62■□□□□ 0.41
CLCC1Q96S66 pRNA.13-201ENST00000619112 90 ntBASIC17.62■□□□□ 0.41
CLCC1Q96S66 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCC1Q96S66 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLCC1Q96S66 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 LINC01960-201ENST00000563759 1884 ntBASIC17.61■□□□□ 0.41
CLCC1Q96S66 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCC1Q96S66 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCC1Q96S66 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCC1Q96S66 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 MIR4466-201ENST00000606121 54 ntBASIC17.61■□□□□ 0.41
CLCC1Q96S66 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.61■□□□□ 0.41
CLCC1Q96S66 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.61■□□□□ 0.41
CLCC1Q96S66 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.61■□□□□ 0.41
CLCC1Q96S66 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCC1Q96S66 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCC1Q96S66 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLCC1Q96S66 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLCC1Q96S66 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 AC131281.2-201ENST00000520478 145 ntBASIC17.6■□□□□ 0.41
CLCC1Q96S66 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLCC1Q96S66 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCC1Q96S66 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLCC1Q96S66 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLCC1Q96S66 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCC1Q96S66 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLCC1Q96S66 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCC1Q96S66 AL157384.1-201ENST00000445995 2473 ntBASIC17.6■□□□□ 0.41
CLCC1Q96S66 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCC1Q96S66 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms