Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD1Q96PZ7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSMD1Q96PZ7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSMD1Q96PZ7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CSMD1Q96PZ7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CSMD1Q96PZ7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.08■□□□□ 0.49
CSMD1Q96PZ7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CSMD1Q96PZ7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.08■□□□□ 0.49
CSMD1Q96PZ7 AC069236.1-201ENST00000604339 616 ntBASIC18.08■□□□□ 0.49
CSMD1Q96PZ7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.08■□□□□ 0.49
CSMD1Q96PZ7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.08■□□□□ 0.49
CSMD1Q96PZ7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD1Q96PZ7 KRT17P1-201ENST00000399211 1546 ntBASIC18.08■□□□□ 0.48
CSMD1Q96PZ7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD1Q96PZ7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD1Q96PZ7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CSMD1Q96PZ7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD1Q96PZ7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.08■□□□□ 0.48
CSMD1Q96PZ7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CSMD1Q96PZ7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 AL353708.3-201ENST00000610272 989 ntBASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 MIR4785-201ENST00000585005 73 ntBASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD1Q96PZ7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 AC069544.1-201ENST00000609399 999 ntBASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 RPS2P55-201ENST00000397318 883 ntBASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 AC107956.1-201ENST00000494359 873 ntBASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 AL162412.1-201ENST00000567129 965 ntBASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 RN7SL471P-201ENST00000580476 299 ntBASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
CSMD1Q96PZ7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 AL121894.2-201ENST00000602977 491 ntBASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 AC092865.7-201ENST00000641832 219 ntBASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CSMD1Q96PZ7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSMD1Q96PZ7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.04■□□□□ 0.48
CSMD1Q96PZ7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.04■□□□□ 0.48
CSMD1Q96PZ7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.04■□□□□ 0.48
CSMD1Q96PZ7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms