Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 AL355802.2-201ENST00000402069 882 ntBASIC21.13■□□□□ 0.97
ARRDC3Q96B67 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.13■□□□□ 0.97
ARRDC3Q96B67 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 GUSBP6-202ENST00000438529 1198 ntBASIC21.12■□□□□ 0.97
ARRDC3Q96B67 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 AC007322.4-201ENST00000509611 723 ntBASIC21.12■□□□□ 0.97
ARRDC3Q96B67 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 ECEL1P1-201ENST00000373592 1742 ntBASIC21.12■□□□□ 0.97
ARRDC3Q96B67 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 RBM17P2-201ENST00000616397 1405 ntBASIC21.12■□□□□ 0.97
ARRDC3Q96B67 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARRDC3Q96B67 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 CYP2T1P-201ENST00000432607 1285 ntBASIC21.11■□□□□ 0.97
ARRDC3Q96B67 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 TSPY6P-201ENST00000448518 926 ntBASIC21.11■□□□□ 0.97
ARRDC3Q96B67 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ARRDC3Q96B67 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 C11orf96-202ENST00000528572 1834 ntBASIC21.1■□□□□ 0.97
ARRDC3Q96B67 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARRDC3Q96B67 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARRDC3Q96B67 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 AF201337.1-201ENST00000520239 748 ntBASIC21.08■□□□□ 0.97
ARRDC3Q96B67 AC105036.2-201ENST00000569468 176 ntBASIC21.08■□□□□ 0.97
ARRDC3Q96B67 AC133552.2-202ENST00000575694 574 ntBASIC21.08■□□□□ 0.97
ARRDC3Q96B67 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARRDC3Q96B67 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.08■□□□□ 0.96
ARRDC3Q96B67 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.07■□□□□ 0.96
ARRDC3Q96B67 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARRDC3Q96B67 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.07■□□□□ 0.96
ARRDC3Q96B67 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms