Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PHF3Q92576 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.07■□□□□ 0.64
PHF3Q92576 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.06■□□□□ 0.64
PHF3Q92576 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF3Q92576 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF3Q92576 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF3Q92576 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.06■□□□□ 0.64
PHF3Q92576 AC010141.2-201ENST00000452426 721 ntBASIC19.06■□□□□ 0.64
PHF3Q92576 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.06■□□□□ 0.64
PHF3Q92576 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.06■□□□□ 0.64
PHF3Q92576 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PHF3Q92576 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.06■□□□□ 0.64
PHF3Q92576 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHF3Q92576 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.06■□□□□ 0.64
PHF3Q92576 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PHF3Q92576 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PHF3Q92576 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PHF3Q92576 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF3Q92576 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.05■□□□□ 0.64
PHF3Q92576 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF3Q92576 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.05■□□□□ 0.64
PHF3Q92576 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.05■□□□□ 0.64
PHF3Q92576 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF3Q92576 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.05■□□□□ 0.64
PHF3Q92576 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF3Q92576 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.05■□□□□ 0.64
PHF3Q92576 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHF3Q92576 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHF3Q92576 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.05■□□□□ 0.64
PHF3Q92576 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.05■□□□□ 0.64
PHF3Q92576 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.05■□□□□ 0.64
PHF3Q92576 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF3Q92576 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF3Q92576 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF3Q92576 SLC29A4P1-201ENST00000398760 971 ntBASIC19.05■□□□□ 0.64
PHF3Q92576 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHF3Q92576 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.05■□□□□ 0.64
PHF3Q92576 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PHF3Q92576 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF3Q92576 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF3Q92576 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PHF3Q92576 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF3Q92576 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PHF3Q92576 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.04■□□□□ 0.64
PHF3Q92576 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF3Q92576 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF3Q92576 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PHF3Q92576 AC026471.6-201ENST00000622954 1905 ntBASIC19.04■□□□□ 0.64
PHF3Q92576 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF3Q92576 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.04■□□□□ 0.64
PHF3Q92576 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PHF3Q92576 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.03■□□□□ 0.64
PHF3Q92576 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.03■□□□□ 0.64
PHF3Q92576 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PHF3Q92576 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.03■□□□□ 0.64
PHF3Q92576 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.03■□□□□ 0.64
PHF3Q92576 AC013268.1-206ENST00000638368 961 ntBASIC19.03■□□□□ 0.64
PHF3Q92576 AC112229.1-201ENST00000639295 961 ntBASIC19.03■□□□□ 0.64
PHF3Q92576 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 FBXW4P1-201ENST00000426721 2239 ntBASIC19.03■□□□□ 0.64
PHF3Q92576 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.03■□□□□ 0.64
PHF3Q92576 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 AC007322.1-201ENST00000426983 750 ntBASIC19.03■□□□□ 0.64
PHF3Q92576 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.03■□□□□ 0.64
PHF3Q92576 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF3Q92576 AC007375.3-201ENST00000600936 2314 ntBASIC19.03■□□□□ 0.64
PHF3Q92576 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHF3Q92576 AP006587.3-201ENST00000525742 1516 ntBASIC19.02■□□□□ 0.64
PHF3Q92576 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHF3Q92576 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.02■□□□□ 0.64
PHF3Q92576 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHF3Q92576 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHF3Q92576 EEF1DP3-203ENST00000566025 782 ntBASIC19.02■□□□□ 0.64
PHF3Q92576 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PHF3Q92576 AL121832.2-201ENST00000610979 668 ntBASIC19.02■□□□□ 0.64
PHF3Q92576 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHF3Q92576 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHF3Q92576 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
PHF3Q92576 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHF3Q92576 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHF3Q92576 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHF3Q92576 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PHF3Q92576 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PHF3Q92576 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.02■□□□□ 0.63
PHF3Q92576 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHF3Q92576 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.01■□□□□ 0.63
PHF3Q92576 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.01■□□□□ 0.63
PHF3Q92576 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.01■□□□□ 0.63
PHF3Q92576 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.01■□□□□ 0.63
PHF3Q92576 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.01■□□□□ 0.63
PHF3Q92576 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms