Protein–RNA interactions for Protein: Q8N3Y7

SDR16C5, Epidermal retinol dehydrogenase 2, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDR16C5Q8N3Y7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDR16C5Q8N3Y7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.63■□□□□ 0.89
SDR16C5Q8N3Y7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDR16C5Q8N3Y7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SDR16C5Q8N3Y7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDR16C5Q8N3Y7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SDR16C5Q8N3Y7 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.62■□□□□ 0.89
SDR16C5Q8N3Y7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SDR16C5Q8N3Y7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDR16C5Q8N3Y7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDR16C5Q8N3Y7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SDR16C5Q8N3Y7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.62■□□□□ 0.89
SDR16C5Q8N3Y7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 AC012676.1-201ENST00000574705 1949 ntBASIC20.61■□□□□ 0.89
SDR16C5Q8N3Y7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 CYP2T1P-201ENST00000432607 1285 ntBASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 AC069152.1-201ENST00000438030 544 ntBASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 CD99P1-205ENST00000527459 561 ntBASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 AL138781.1-201ENST00000566567 1274 ntBASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 MIR4758-201ENST00000577688 71 ntBASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SDR16C5Q8N3Y7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 AL591742.1-201ENST00000604433 565 ntBASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 RBM17P2-201ENST00000616397 1405 ntBASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.59■□□□□ 0.89
SDR16C5Q8N3Y7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 AC003102.1-202ENST00000563394 1796 ntBASIC20.58■□□□□ 0.89
SDR16C5Q8N3Y7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.58■□□□□ 0.88
SDR16C5Q8N3Y7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDR16C5Q8N3Y7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.58■□□□□ 0.88
SDR16C5Q8N3Y7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDR16C5Q8N3Y7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.58■□□□□ 0.88
SDR16C5Q8N3Y7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms