Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 ESRRAP1-201ENST00000400596 1257 ntBASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 DUSP5P2-201ENST00000426873 1033 ntBASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 AC091874.3-201ENST00000512672 1195 ntBASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 AC243732.1-201ENST00000612648 864 ntBASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.49■■□□□ 1.03
SYNPOQ8N3V7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
SYNPOQ8N3V7 AC079834.2-201ENST00000609776 1949 ntBASIC21.49■■□□□ 1.03
SYNPOQ8N3V7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.49■■□□□ 1.03
SYNPOQ8N3V7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPOQ8N3V7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.49■■□□□ 1.03
SYNPOQ8N3V7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SYNPOQ8N3V7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.49■■□□□ 1.03
SYNPOQ8N3V7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYNPOQ8N3V7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
SYNPOQ8N3V7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 AC010980.2-201ENST00000587099 1412 ntBASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 RBM17P2-201ENST00000616397 1405 ntBASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.48■■□□□ 1.03
SYNPOQ8N3V7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 GCSHP5-201ENST00000443090 522 ntBASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYNPOQ8N3V7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 AC098590.1-201ENST00000468126 897 ntBASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 RPS2P52-201ENST00000469610 820 ntBASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYNPOQ8N3V7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYNPOQ8N3V7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYNPOQ8N3V7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYNPOQ8N3V7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYNPOQ8N3V7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.45■■□□□ 1.02
SYNPOQ8N3V7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SYNPOQ8N3V7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.45■■□□□ 1.02
SYNPOQ8N3V7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.45■■□□□ 1.02
SYNPOQ8N3V7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYNPOQ8N3V7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYNPOQ8N3V7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SYNPOQ8N3V7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms