Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 AC233723.2-201ENST00000623798 2106 ntBASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 AC073111.5-205ENST00000641717 521 ntBASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 KRT18P20-201ENST00000548986 1279 ntBASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 AC008175.2-201ENST00000612840 297 ntBASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 AC120498.10-201ENST00000621827 505 ntBASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 MYCNOS-205ENST00000641950 531 ntBASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM48Q8IWZ4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 AC242852.2-201ENST00000615738 1807 ntBASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM48Q8IWZ4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 AC026185.1-201ENST00000445748 174 ntBASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 MFSD11-216ENST00000590393 1141 ntBASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 GUSBP5-202ENST00000510805 1989 ntBASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM48Q8IWZ4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 AC003102.1-202ENST00000563394 1796 ntBASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 CDCA4P2-201ENST00000441182 718 ntBASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms