Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.81■■□□□ 1.08
PRPF39Q86UA1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 AC090192.1-201ENST00000517740 490 ntBASIC21.8■■□□□ 1.08
PRPF39Q86UA1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.8■■□□□ 1.08
PRPF39Q86UA1 BX005040.4-201ENST00000637145 1518 ntBASIC21.8■■□□□ 1.08
PRPF39Q86UA1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PRPF39Q86UA1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF39Q86UA1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF39Q86UA1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF39Q86UA1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
PRPF39Q86UA1 AC026471.6-201ENST00000622954 1905 ntBASIC21.79■■□□□ 1.08
PRPF39Q86UA1 AC004911.1-201ENST00000416316 871 ntBASIC21.79■■□□□ 1.08
PRPF39Q86UA1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.79■■□□□ 1.08
PRPF39Q86UA1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.79■■□□□ 1.08
PRPF39Q86UA1 AC092437.1-201ENST00000624794 1048 ntBASIC21.79■■□□□ 1.08
PRPF39Q86UA1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF39Q86UA1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF39Q86UA1 AP004607.7-201ENST00000527152 1677 ntBASIC21.79■■□□□ 1.08
PRPF39Q86UA1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF39Q86UA1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF39Q86UA1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.77■■□□□ 1.08
PRPF39Q86UA1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF39Q86UA1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.77■■□□□ 1.08
PRPF39Q86UA1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.77■■□□□ 1.08
PRPF39Q86UA1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.77■■□□□ 1.08
PRPF39Q86UA1 TPRG1LP1-201ENST00000598702 760 ntBASIC21.77■■□□□ 1.08
PRPF39Q86UA1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.77■■□□□ 1.08
PRPF39Q86UA1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PRPF39Q86UA1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
PRPF39Q86UA1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PRPF39Q86UA1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PRPF39Q86UA1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF39Q86UA1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF39Q86UA1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF39Q86UA1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.76■■□□□ 1.07
PRPF39Q86UA1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF39Q86UA1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF39Q86UA1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF39Q86UA1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF39Q86UA1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF39Q86UA1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PRPF39Q86UA1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF39Q86UA1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF39Q86UA1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.75■■□□□ 1.07
PRPF39Q86UA1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PRPF39Q86UA1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.75■■□□□ 1.07
PRPF39Q86UA1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF39Q86UA1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF39Q86UA1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.74■■□□□ 1.07
PRPF39Q86UA1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF39Q86UA1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF39Q86UA1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF39Q86UA1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF39Q86UA1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms