Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CCDC18Q5T9S5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC32.86■■■□□ 2.85
CCDC18Q5T9S5 AC008687.6-201ENST00000596318 630 ntBASIC32.86■■■□□ 2.85
CCDC18Q5T9S5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC32.86■■■□□ 2.85
CCDC18Q5T9S5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC32.85■■■□□ 2.85
CCDC18Q5T9S5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CCDC18Q5T9S5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CCDC18Q5T9S5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC32.85■■■□□ 2.85
CCDC18Q5T9S5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CCDC18Q5T9S5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CCDC18Q5T9S5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CCDC18Q5T9S5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CCDC18Q5T9S5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC32.84■■■□□ 2.85
CCDC18Q5T9S5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC32.84■■■□□ 2.85
CCDC18Q5T9S5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC32.84■■■□□ 2.85
CCDC18Q5T9S5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC32.84■■■□□ 2.85
CCDC18Q5T9S5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CCDC18Q5T9S5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CCDC18Q5T9S5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
CCDC18Q5T9S5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 AC098590.1-201ENST00000468126 897 ntBASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 AC080038.3-201ENST00000623346 1952 ntBASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
CCDC18Q5T9S5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC32.82■■■□□ 2.84
CCDC18Q5T9S5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CCDC18Q5T9S5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CCDC18Q5T9S5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC32.82■■■□□ 2.84
CCDC18Q5T9S5 PRORSD1P-201ENST00000295112 541 ntBASIC32.82■■■□□ 2.84
CCDC18Q5T9S5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC32.82■■■□□ 2.84
CCDC18Q5T9S5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC32.82■■■□□ 2.84
CCDC18Q5T9S5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CCDC18Q5T9S5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
CCDC18Q5T9S5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC32.81■■■□□ 2.84
CCDC18Q5T9S5 ADM-205ENST00000528544 586 ntTSL 2 BASIC32.81■■■□□ 2.84
CCDC18Q5T9S5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC32.81■■■□□ 2.84
CCDC18Q5T9S5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC32.81■■■□□ 2.84
CCDC18Q5T9S5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
CCDC18Q5T9S5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CCDC18Q5T9S5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
CCDC18Q5T9S5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC32.81■■■□□ 2.84
CCDC18Q5T9S5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 AC245052.3-201ENST00000450182 901 ntBASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 AC097658.1-201ENST00000475555 843 ntBASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
CCDC18Q5T9S5 AC026471.6-201ENST00000622954 1905 ntBASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 SERPINH1P1-201ENST00000419794 1249 ntBASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CCDC18Q5T9S5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CCDC18Q5T9S5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CCDC18Q5T9S5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CCDC18Q5T9S5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CCDC18Q5T9S5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CCDC18Q5T9S5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC32.77■■■□□ 2.84
CCDC18Q5T9S5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CCDC18Q5T9S5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC32.77■■■□□ 2.84
CCDC18Q5T9S5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CCDC18Q5T9S5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CCDC18Q5T9S5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CCDC18Q5T9S5 FAM99A-202ENST00000538190 1989 ntBASIC32.76■■■□□ 2.84
CCDC18Q5T9S5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
CCDC18Q5T9S5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
CCDC18Q5T9S5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC32.76■■■□□ 2.84
CCDC18Q5T9S5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
CCDC18Q5T9S5 AC100791.3-201ENST00000617619 330 ntBASIC32.76■■■□□ 2.84
CCDC18Q5T9S5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC32.76■■■□□ 2.84
CCDC18Q5T9S5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC32.76■■■□□ 2.84
CCDC18Q5T9S5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
CCDC18Q5T9S5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
CCDC18Q5T9S5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC32.75■■■□□ 2.83
CCDC18Q5T9S5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC32.75■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms