Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA1P56159 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.97■□□□□ 0.63
GFRA1P56159 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.97■□□□□ 0.63
GFRA1P56159 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
GFRA1P56159 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
GFRA1P56159 AC231657.2-201ENST00000624556 255 ntBASIC18.97■□□□□ 0.63
GFRA1P56159 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GFRA1P56159 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA1P56159 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA1P56159 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA1P56159 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA1P56159 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFRA1P56159 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA1P56159 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA1P56159 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.96■□□□□ 0.63
GFRA1P56159 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.96■□□□□ 0.63
GFRA1P56159 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.96■□□□□ 0.63
GFRA1P56159 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.96■□□□□ 0.63
GFRA1P56159 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA1P56159 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.96■□□□□ 0.63
GFRA1P56159 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA1P56159 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA1P56159 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA1P56159 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
GFRA1P56159 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA1P56159 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GFRA1P56159 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
GFRA1P56159 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.95■□□□□ 0.62
GFRA1P56159 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.95■□□□□ 0.62
GFRA1P56159 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA1P56159 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA1P56159 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA1P56159 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA1P56159 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA1P56159 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA1P56159 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.95■□□□□ 0.62
GFRA1P56159 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.95■□□□□ 0.62
GFRA1P56159 CROCCP5-201ENST00000436658 830 ntBASIC18.95■□□□□ 0.62
GFRA1P56159 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
GFRA1P56159 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.95■□□□□ 0.62
GFRA1P56159 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA1P56159 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.95■□□□□ 0.62
GFRA1P56159 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA1P56159 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA1P56159 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.95■□□□□ 0.62
GFRA1P56159 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA1P56159 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFRA1P56159 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.94■□□□□ 0.62
GFRA1P56159 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA1P56159 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.94■□□□□ 0.62
GFRA1P56159 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
GFRA1P56159 CNN2P6-201ENST00000439038 900 ntBASIC18.94■□□□□ 0.62
GFRA1P56159 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.94■□□□□ 0.62
GFRA1P56159 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.94■□□□□ 0.62
GFRA1P56159 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.94■□□□□ 0.62
GFRA1P56159 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.94■□□□□ 0.62
GFRA1P56159 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
GFRA1P56159 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA1P56159 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA1P56159 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFRA1P56159 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA1P56159 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GFRA1P56159 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA1P56159 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GFRA1P56159 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GFRA1P56159 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA1P56159 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA1P56159 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GFRA1P56159 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.93■□□□□ 0.62
GFRA1P56159 AC007322.1-201ENST00000426983 750 ntBASIC18.93■□□□□ 0.62
GFRA1P56159 TERF1P5-201ENST00000477545 1207 ntBASIC18.93■□□□□ 0.62
GFRA1P56159 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.93■□□□□ 0.62
GFRA1P56159 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.93■□□□□ 0.62
GFRA1P56159 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.93■□□□□ 0.62
GFRA1P56159 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.93■□□□□ 0.62
GFRA1P56159 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA1P56159 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.92■□□□□ 0.62
GFRA1P56159 EP400NL-214ENST00000641289 2402 ntBASIC18.92■□□□□ 0.62
GFRA1P56159 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA1P56159 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA1P56159 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
GFRA1P56159 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA1P56159 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.92■□□□□ 0.62
GFRA1P56159 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GFRA1P56159 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA1P56159 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA1P56159 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.92■□□□□ 0.62
GFRA1P56159 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.92■□□□□ 0.62
GFRA1P56159 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GFRA1P56159 AC013268.1-206ENST00000638368 961 ntBASIC18.92■□□□□ 0.62
GFRA1P56159 AC112229.1-201ENST00000639295 961 ntBASIC18.92■□□□□ 0.62
GFRA1P56159 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GFRA1P56159 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA1P56159 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.92■□□□□ 0.62
GFRA1P56159 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA1P56159 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA1P56159 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.92■□□□□ 0.62
GFRA1P56159 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA1P56159 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA1P56159 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms