Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 MCM21YDR318W 1107 nt2.28□□□□□ -2.04
LSM1P47017 HMF1YER057C 390 nt2.28□□□□□ -2.04
LSM1P47017 DOG1YHR044C 741 nt2.28□□□□□ -2.04
LSM1P47017 YKL071WYKL071W 771 nt2.28□□□□□ -2.04
LSM1P47017 YML037CYML037C 1023 nt2.28□□□□□ -2.04
LSM1P47017 YNR062CYNR062C 984 nt2.28□□□□□ -2.04
LSM1P47017 YOL134CYOL134C 390 nt2.28□□□□□ -2.04
LSM1P47017 MRP2YPR166C 348 nt2.28□□□□□ -2.04
LSM1P47017 BNI1YNL271C 5862 nt2.28□□□□□ -2.04
LSM1P47017 HUL5YGL141W 2733 nt2.28□□□□□ -2.04
LSM1P47017 PDR1YGL013C 3207 nt2.28□□□□□ -2.04
LSM1P47017 GCV2YMR189W 3105 nt2.27□□□□□ -2.05
LSM1P47017 YHR180W-AYHR180W-A 183 nt2.27□□□□□ -2.05
LSM1P47017 YAR075WYAR075W 474 nt2.27□□□□□ -2.05
LSM1P47017 PEX17YNL214W 600 nt2.27□□□□□ -2.05
LSM1P47017 ATG3YNR007C 933 nt2.27□□□□□ -2.05
LSM1P47017 TRM112YNR046W 408 nt2.27□□□□□ -2.05
LSM1P47017 BTS1YPL069C 1008 nt2.27□□□□□ -2.05
LSM1P47017 UBP15YMR304W 3693 nt2.27□□□□□ -2.05
LSM1P47017 RTT105YER104W 627 nt2.26□□□□□ -2.05
LSM1P47017 YFL041W-AYFL041W-A 192 nt2.26□□□□□ -2.05
LSM1P47017 SUP56tL(CAA)A 82 nt2.26□□□□□ -2.05
LSM1P47017 SUP53tL(CAA)C 82 nt2.26□□□□□ -2.05
LSM1P47017 tL(CAA)DtL(CAA)D 82 nt2.26□□□□□ -2.05
LSM1P47017 tL(CAA)G1tL(CAA)G1 82 nt2.26□□□□□ -2.05
LSM1P47017 SUP54tL(CAA)G2 82 nt2.26□□□□□ -2.05
LSM1P47017 tL(CAA)G3tL(CAA)G3 82 nt2.26□□□□□ -2.05
LSM1P47017 tL(CAA)KtL(CAA)K 82 nt2.26□□□□□ -2.05
LSM1P47017 tL(CAA)LtL(CAA)L 82 nt2.26□□□□□ -2.05
LSM1P47017 tL(CAA)MtL(CAA)M 82 nt2.26□□□□□ -2.05
LSM1P47017 tL(CAA)NtL(CAA)N 82 nt2.26□□□□□ -2.05
LSM1P47017 RPL15AYLR029C 615 nt2.26□□□□□ -2.05
LSM1P47017 CWC24YLR323C 780 nt2.26□□□□□ -2.05
LSM1P47017 PML39YML107C 1005 nt2.26□□□□□ -2.05
LSM1P47017 COQ10YOL008W 624 nt2.26□□□□□ -2.05
LSM1P47017 ATG34YOL083W 1239 nt2.26□□□□□ -2.05
LSM1P47017 MPD1YOR288C 957 nt2.26□□□□□ -2.05
LSM1P47017 RRG8YPR116W 834 nt2.26□□□□□ -2.05
LSM1P47017 SNX41YDR425W 1878 nt2.26□□□□□ -2.05
LSM1P47017 AMS1YGL156W 3252 nt2.25□□□□□ -2.05
LSM1P47017 BOI1YBL085W 2943 nt2.25□□□□□ -2.05
LSM1P47017 YFH1YDL120W 525 nt2.25□□□□□ -2.05
LSM1P47017 RDI1YDL135C 609 nt2.25□□□□□ -2.05
LSM1P47017 TIM9YEL020W-A 264 nt2.25□□□□□ -2.05
LSM1P47017 COG2YGR120C 789 nt2.25□□□□□ -2.05
LSM1P47017 MRPL9YGR220C 810 nt2.25□□□□□ -2.05
LSM1P47017 SNX4YJL036W 1272 nt2.25□□□□□ -2.05
LSM1P47017 LSM8YJR022W 330 nt2.25□□□□□ -2.05
LSM1P47017 TPS2YDR074W 2691 nt2.25□□□□□ -2.05
LSM1P47017 CWH41YGL027C 2502 nt2.25□□□□□ -2.05
LSM1P47017 EDS1YBR033W 2760 nt2.25□□□□□ -2.05
LSM1P47017 DSF2YBR007C 2211 nt2.25□□□□□ -2.05
LSM1P47017 TRS130YMR218C 3309 nt2.24□□□□□ -2.05
LSM1P47017 YJL181WYJL181W 1836 nt2.24□□□□□ -2.05
LSM1P47017 YBR138CYBR138C 1575 nt2.24□□□□□ -2.05
LSM1P47017 STH1YIL126W 4080 nt2.24□□□□□ -2.05
LSM1P47017 HMO1YDR174W 741 nt2.24□□□□□ -2.05
LSM1P47017 YGL041W-AYGL041W-A 465 nt2.24□□□□□ -2.05
LSM1P47017 ERV1YGR029W 570 nt2.24□□□□□ -2.05
LSM1P47017 PEX4YGR133W 552 nt2.24□□□□□ -2.05
LSM1P47017 NNT1YLR285W 786 nt2.24□□□□□ -2.05
LSM1P47017 YBL077WYBL077W 432 nt2.24□□□□□ -2.05
LSM1P47017 APD1YBR151W 951 nt2.24□□□□□ -2.05
LSM1P47017 MSH4YFL003C 2637 nt2.24□□□□□ -2.05
LSM1P47017 SWR1YDR334W 4545 nt2.24□□□□□ -2.05
LSM1P47017 AYT1YLL063C 1425 nt2.24□□□□□ -2.05
LSM1P47017 SCY1YGL083W 2415 nt2.23□□□□□ -2.05
LSM1P47017 ANR2YKL047W 1551 nt2.23□□□□□ -2.05
LSM1P47017 YNL046WYNL046W 519 nt2.23□□□□□ -2.05
LSM1P47017 YBR209WYBR209W 318 nt2.23□□□□□ -2.05
LSM1P47017 YDR186CYDR186C 2634 nt2.23□□□□□ -2.05
LSM1P47017 PTP3YER075C 2787 nt2.23□□□□□ -2.05
LSM1P47017 ORC1YML065W 2745 nt2.23□□□□□ -2.05
LSM1P47017 MCD1YDL003W 1701 nt2.22□□□□□ -2.05
LSM1P47017 HAA1YPR008W 2085 nt2.22□□□□□ -2.05
LSM1P47017 SPB1YCL054W 2526 nt2.22□□□□□ -2.05
LSM1P47017 MAK5YBR142W 2322 nt2.22□□□□□ -2.05
LSM1P47017 YDR355CYDR355C 303 nt2.22□□□□□ -2.05
LSM1P47017 YEL075CYEL075C 369 nt2.22□□□□□ -2.05
LSM1P47017 PMI40YER003C 1290 nt2.22□□□□□ -2.05
LSM1P47017 YGL159WYGL159W 1113 nt2.22□□□□□ -2.05
LSM1P47017 YBL028CYBL028C 321 nt2.22□□□□□ -2.05
LSM1P47017 YSF3YNL138W-A 258 nt2.22□□□□□ -2.05
LSM1P47017 MSN1YOL116W 1149 nt2.22□□□□□ -2.05
LSM1P47017 ARF3YOR094W 552 nt2.22□□□□□ -2.05
LSM1P47017 UAF30YOR295W 687 nt2.22□□□□□ -2.05
LSM1P47017 MPS1YDL028C 2295 nt2.22□□□□□ -2.05
LSM1P47017 SLI1YGR212W 1407 nt2.22□□□□□ -2.05
LSM1P47017 HAP4YKL109W 1665 nt2.22□□□□□ -2.05
LSM1P47017 RPN4YDL020C 1596 nt2.21□□□□□ -2.06
LSM1P47017 SMX2YFL017W-A 234 nt2.21□□□□□ -2.06
LSM1P47017 EPT1YHR123W 1176 nt2.21□□□□□ -2.06
LSM1P47017 MCR1YKL150W 909 nt2.21□□□□□ -2.06
LSM1P47017 CDC123YLR215C 1083 nt2.21□□□□□ -2.06
LSM1P47017 YML096WYML096W 1578 nt2.21□□□□□ -2.06
LSM1P47017 YIM2YMR151W 438 nt2.21□□□□□ -2.06
LSM1P47017 YMR316C-AYMR316C-A 312 nt2.21□□□□□ -2.06
LSM1P47017 AFI1YOR129C 2682 nt2.21□□□□□ -2.06
LSM1P47017 MSA1YOR066W 1890 nt2.2□□□□□ -2.06
LSM1P47017 tF(GAA)DtF(GAA)D 73 nt2.2□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 40.8 ms