Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.05■■□□□ 1.44
HTTP42858 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
HTTP42858 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HTTP42858 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC24.04■■□□□ 1.44
HTTP42858 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
HTTP42858 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
HTTP42858 AL139125.2-201ENST00000623134 1869 ntBASIC24.04■■□□□ 1.44
HTTP42858 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.04■■□□□ 1.44
HTTP42858 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.04■■□□□ 1.44
HTTP42858 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
HTTP42858 RPS2P55-201ENST00000397318 883 ntBASIC24.04■■□□□ 1.44
HTTP42858 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.04■■□□□ 1.44
HTTP42858 AC107956.1-201ENST00000494359 873 ntBASIC24.04■■□□□ 1.44
HTTP42858 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
HTTP42858 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
HTTP42858 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HTTP42858 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HTTP42858 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC24.04■■□□□ 1.44
HTTP42858 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
HTTP42858 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.03■■□□□ 1.44
HTTP42858 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.03■■□□□ 1.44
HTTP42858 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
HTTP42858 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HTTP42858 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
HTTP42858 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.03■■□□□ 1.44
HTTP42858 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
HTTP42858 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
HTTP42858 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.03■■□□□ 1.44
HTTP42858 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.02■■□□□ 1.44
HTTP42858 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
HTTP42858 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HTTP42858 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.02■■□□□ 1.44
HTTP42858 AL355472.2-201ENST00000422958 438 ntBASIC24.02■■□□□ 1.44
HTTP42858 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HTTP42858 PNMA6B-201ENST00000538162 1200 ntBASIC24.02■■□□□ 1.44
HTTP42858 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.02■■□□□ 1.44
HTTP42858 RN7SL471P-201ENST00000580476 299 ntBASIC24.02■■□□□ 1.44
HTTP42858 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HTTP42858 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
HTTP42858 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HTTP42858 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HTTP42858 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HTTP42858 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HTTP42858 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.02■■□□□ 1.44
HTTP42858 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HTTP42858 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HTTP42858 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.02■■□□□ 1.43
HTTP42858 SPIB-206ENST00000596074 847 ntTSL 2 BASIC24.01■■□□□ 1.43
HTTP42858 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.01■■□□□ 1.43
HTTP42858 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.01■■□□□ 1.43
HTTP42858 LINC00526-201ENST00000581067 1875 ntBASIC24.01■■□□□ 1.43
HTTP42858 TMPOP1-202ENST00000424642 1267 ntBASIC24.01■■□□□ 1.43
HTTP42858 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HTTP42858 SOX15-203ENST00000570788 1093 ntBASIC24.01■■□□□ 1.43
HTTP42858 AC053503.5-201ENST00000601508 636 ntBASIC24.01■■□□□ 1.43
HTTP42858 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
HTTP42858 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.01■■□□□ 1.43
HTTP42858 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HTTP42858 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24■■□□□ 1.43
HTTP42858 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC24■■□□□ 1.43
HTTP42858 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24■■□□□ 1.43
HTTP42858 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
HTTP42858 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24■■□□□ 1.43
HTTP42858 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24■■□□□ 1.43
HTTP42858 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
HTTP42858 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24■■□□□ 1.43
HTTP42858 AL049637.2-201ENST00000641778 930 ntBASIC24■■□□□ 1.43
HTTP42858 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24■■□□□ 1.43
HTTP42858 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
HTTP42858 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
HTTP42858 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
HTTP42858 AC087499.1-201ENST00000418141 1075 ntBASIC23.99■■□□□ 1.43
HTTP42858 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HTTP42858 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HTTP42858 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HTTP42858 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.99■■□□□ 1.43
HTTP42858 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
HTTP42858 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HTTP42858 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.99■■□□□ 1.43
HTTP42858 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.99■■□□□ 1.43
HTTP42858 LINC01124-201ENST00000409786 2117 ntBASIC23.99■■□□□ 1.43
HTTP42858 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HTTP42858 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HTTP42858 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
HTTP42858 KRT16P2-201ENST00000414673 1423 ntBASIC23.98■■□□□ 1.43
HTTP42858 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
HTTP42858 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HTTP42858 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HTTP42858 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.98■■□□□ 1.43
HTTP42858 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
HTTP42858 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HTTP42858 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
HTTP42858 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
HTTP42858 AL355075.4-201ENST00000554988 638 ntBASIC23.97■■□□□ 1.43
HTTP42858 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.97■■□□□ 1.43
HTTP42858 AC133561.5-201ENST00000635547 218 ntBASIC23.97■■□□□ 1.43
HTTP42858 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HTTP42858 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
HTTP42858 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HTTP42858 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms