Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 FIG1YBR040W 897 nt2.79□□□□□ -1.96
TDA11P38854 TIF4631YGR162W 2859 nt2.79□□□□□ -1.96
TDA11P38854 KEL2YGR238C 2649 nt2.79□□□□□ -1.96
TDA11P38854 YCR045W-AYCR045W-A 351 nt2.78□□□□□ -1.96
TDA11P38854 YGL218WYGL218W 651 nt2.78□□□□□ -1.96
TDA11P38854 SEC65YML105C 822 nt2.78□□□□□ -1.96
TDA11P38854 ECM13YBL043W 774 nt2.78□□□□□ -1.96
TDA11P38854 YNL109WYNL109W 546 nt2.78□□□□□ -1.96
TDA11P38854 YNL184CYNL184C 327 nt2.78□□□□□ -1.96
TDA11P38854 RUF5-1RUF5-1 710 nt2.78□□□□□ -1.96
TDA11P38854 RUF5-2RUF5-2 710 nt2.78□□□□□ -1.96
TDA11P38854 TPK2YPL203W 1143 nt2.78□□□□□ -1.96
TDA11P38854 ERV15YBR210W 429 nt2.78□□□□□ -1.96
TDA11P38854 FAA2YER015W 2235 nt2.78□□□□□ -1.96
TDA11P38854 IPI3YNL182C 1668 nt2.78□□□□□ -1.96
TDA11P38854 FLO5YHR211W 3228 nt2.78□□□□□ -1.97
TDA11P38854 ESC1YMR219W 4977 nt2.77□□□□□ -1.97
TDA11P38854 PET100YDR079W 336 nt2.77□□□□□ -1.97
TDA11P38854 YDR209CYDR209C 414 nt2.77□□□□□ -1.97
TDA11P38854 YDR491CYDR491C 492 nt2.77□□□□□ -1.97
TDA11P38854 AIM11YER093C-A 414 nt2.77□□□□□ -1.97
TDA11P38854 RPB9YGL070C 369 nt2.77□□□□□ -1.97
TDA11P38854 YGL138CYGL138C 1038 nt2.77□□□□□ -1.97
TDA11P38854 YGR039WYGR039W 312 nt2.77□□□□□ -1.97
TDA11P38854 RPL8BYLL045C 771 nt2.77□□□□□ -1.97
TDA11P38854 GSP1YLR293C 660 nt2.77□□□□□ -1.97
TDA11P38854 ATG29YPL166W 642 nt2.77□□□□□ -1.97
TDA11P38854 YBR085C-AYBR085C-A 258 nt2.77□□□□□ -1.97
TDA11P38854 PRP8YHR165C 7242 nt2.77□□□□□ -1.97
TDA11P38854 NTO1YPR031W 2247 nt2.77□□□□□ -1.97
TDA11P38854 FRE2YKL220C 2136 nt2.77□□□□□ -1.97
TDA11P38854 SST2YLR452C 2097 nt2.77□□□□□ -1.97
TDA11P38854 GYP7YDL234C 2241 nt2.76□□□□□ -1.97
TDA11P38854 TPO5YKL174C 1857 nt2.76□□□□□ -1.97
TDA11P38854 AST2YER101C 1293 nt2.76□□□□□ -1.97
TDA11P38854 YFR010W-AYFR010W-A 189 nt2.76□□□□□ -1.97
TDA11P38854 ENP2YGR145W 2124 nt2.76□□□□□ -1.97
TDA11P38854 MMF1YIL051C 438 nt2.76□□□□□ -1.97
TDA11P38854 YKL033W-AYKL033W-A 711 nt2.76□□□□□ -1.97
TDA11P38854 RIF2YLR453C 1188 nt2.76□□□□□ -1.97
TDA11P38854 ICS2YBR157C 768 nt2.76□□□□□ -1.97
TDA11P38854 SRO77YBL106C 3033 nt2.76□□□□□ -1.97
TDA11P38854 RGC1YPR115W 3252 nt2.76□□□□□ -1.97
TDA11P38854 YDR131CYDR131C 1671 nt2.76□□□□□ -1.97
TDA11P38854 CIK1YMR198W 1785 nt2.75□□□□□ -1.97
TDA11P38854 PPH3YDR075W 927 nt2.75□□□□□ -1.97
TDA11P38854 COBQ0105 1158 nt2.75□□□□□ -1.97
TDA11P38854 YIP5YGL161C 933 nt2.75□□□□□ -1.97
TDA11P38854 UPF3YGR072W 1164 nt2.75□□□□□ -1.97
TDA11P38854 EFG1YGR271C-A 702 nt2.75□□□□□ -1.97
TDA11P38854 YIL102C-AYIL102C-A 228 nt2.75□□□□□ -1.97
TDA11P38854 CSM3YMR048W 954 nt2.75□□□□□ -1.97
TDA11P38854 PNO1YOR145C 825 nt2.75□□□□□ -1.97
TDA11P38854 YOR203WYOR203W 354 nt2.75□□□□□ -1.97
TDA11P38854 PRM4YPL156C 855 nt2.75□□□□□ -1.97
TDA11P38854 YPR203WYPR203W 309 nt2.75□□□□□ -1.97
TDA11P38854 MSH2YOL090W 2895 nt2.75□□□□□ -1.97
TDA11P38854 AXL1YPR122W 3627 nt2.74□□□□□ -1.97
TDA11P38854 YEL075CYEL075C 369 nt2.74□□□□□ -1.97
TDA11P38854 MST27YGL051W 705 nt2.74□□□□□ -1.97
TDA11P38854 RPL14BYHL001W 417 nt2.74□□□□□ -1.97
TDA11P38854 RPL15AYLR029C 615 nt2.74□□□□□ -1.97
TDA11P38854 YOL118CYOL118C 309 nt2.74□□□□□ -1.97
TDA11P38854 SRL1YOR247W 633 nt2.74□□□□□ -1.97
TDA11P38854 UBP8YMR223W 1416 nt2.74□□□□□ -1.97
TDA11P38854 DIA2YOR080W 2199 nt2.74□□□□□ -1.97
TDA11P38854 MYO5YMR109W 3660 nt2.74□□□□□ -1.97
TDA11P38854 JSN1YJR091C 3276 nt2.74□□□□□ -1.97
TDA11P38854 PEX6YNL329C 3093 nt2.74□□□□□ -1.97
TDA11P38854 RSN1YMR266W 2862 nt2.74□□□□□ -1.97
TDA11P38854 YIL169CYIL169C 2988 nt2.73□□□□□ -1.97
TDA11P38854 BNI4YNL233W 2679 nt2.73□□□□□ -1.97
TDA11P38854 PFS1YHR185C 714 nt2.73□□□□□ -1.97
TDA11P38854 PML39YML107C 1005 nt2.73□□□□□ -1.97
TDA11P38854 ATG16YMR159C 453 nt2.73□□□□□ -1.97
TDA11P38854 MCT1YOR221C 1083 nt2.73□□□□□ -1.97
TDA11P38854 HFM1YGL251C 3564 nt2.73□□□□□ -1.97
TDA11P38854 APC5YOR249C 2058 nt2.73□□□□□ -1.97
TDA11P38854 SLY41YOR307C 1362 nt2.73□□□□□ -1.97
TDA11P38854 ILS1YBL076C 3219 nt2.72□□□□□ -1.97
TDA11P38854 YLR001CYLR001C 2589 nt2.72□□□□□ -1.97
TDA11P38854 TCA17YEL048C 459 nt2.72□□□□□ -1.97
TDA11P38854 RTT105YER104W 627 nt2.72□□□□□ -1.97
TDA11P38854 SMX2YFL017W-A 234 nt2.72□□□□□ -1.97
TDA11P38854 MPS2YGL075C 1164 nt2.72□□□□□ -1.97
TDA11P38854 RPL24BYGR148C 468 nt2.72□□□□□ -1.97
TDA11P38854 YLR163W-AYLR163W-A 114 nt2.72□□□□□ -1.97
TDA11P38854 LTP1YPR073C 486 nt2.72□□□□□ -1.97
TDA11P38854 CTP1YBR291C 900 nt2.72□□□□□ -1.97
TDA11P38854 WHI3YNL197C 1986 nt2.72□□□□□ -1.97
TDA11P38854 AI4Q0065 1671 nt2.72□□□□□ -1.97
TDA11P38854 ROG1YGL144C 2058 nt2.72□□□□□ -1.97
TDA11P38854 MSB2YGR014W 3921 nt2.72□□□□□ -1.97
TDA11P38854 MNT3YIL014W 1893 nt2.71□□□□□ -1.98
TDA11P38854 TOM70YNL121C 1854 nt2.71□□□□□ -1.98
TDA11P38854 DUF1YOL087C 3351 nt2.71□□□□□ -1.98
TDA11P38854 CDC55YGL190C 1581 nt2.71□□□□□ -1.98
TDA11P38854 ARP9YMR033W 1404 nt2.71□□□□□ -1.98
TDA11P38854 YDL050CYDL050C 372 nt2.71□□□□□ -1.98
TDA11P38854 PEX14YGL153W 1026 nt2.71□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms