Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 ORC6YHR118C 1308 nt4.61□□□□□ -1.67
PEX28P38848 MNT4YNR059W 1743 nt4.6□□□□□ -1.67
PEX28P38848 DAL81YIR023W 2913 nt4.6□□□□□ -1.67
PEX28P38848 MSC2YDR205W 2175 nt4.6□□□□□ -1.67
PEX28P38848 GDH2YDL215C 3279 nt4.6□□□□□ -1.67
PEX28P38848 snR68snR68 136 nt4.6□□□□□ -1.67
PEX28P38848 YER135CYER135C 393 nt4.6□□□□□ -1.67
PEX28P38848 AML1YGR001C 747 nt4.6□□□□□ -1.67
PEX28P38848 MTM1YGR257C 1101 nt4.6□□□□□ -1.67
PEX28P38848 RPS20YHL015W 366 nt4.6□□□□□ -1.67
PEX28P38848 YIL165CYIL165C 360 nt4.6□□□□□ -1.67
PEX28P38848 KTR2YKR061W 1278 nt4.6□□□□□ -1.67
PEX28P38848 DAD2YKR083C 402 nt4.6□□□□□ -1.67
PEX28P38848 YOR082CYOR082C 342 nt4.6□□□□□ -1.67
PEX28P38848 MSS18YPR134W 807 nt4.6□□□□□ -1.67
PEX28P38848 AIM4YBR194W 372 nt4.6□□□□□ -1.67
PEX28P38848 PCA1YBR295W 3651 nt4.6□□□□□ -1.67
PEX28P38848 SWP82YFL049W 1872 nt4.6□□□□□ -1.67
PEX28P38848 YBR238CYBR238C 2196 nt4.6□□□□□ -1.67
PEX28P38848 HUL5YGL141W 2733 nt4.59□□□□□ -1.67
PEX28P38848 ROT2YBR229C 2865 nt4.59□□□□□ -1.67
PEX28P38848 PEX29YDR479C 1665 nt4.59□□□□□ -1.67
PEX28P38848 YER181CYER181C 324 nt4.59□□□□□ -1.67
PEX28P38848 GCN20YFR009W 2259 nt4.59□□□□□ -1.67
PEX28P38848 YHR214C-CYHR214C-C 1437 nt4.59□□□□□ -1.67
PEX28P38848 AGE2YIL044C 897 nt4.59□□□□□ -1.67
PEX28P38848 RPL40BYKR094C 387 nt4.59□□□□□ -1.67
PEX28P38848 IDP2YLR174W 1239 nt4.59□□□□□ -1.67
PEX28P38848 TIF11YMR260C 462 nt4.59□□□□□ -1.67
PEX28P38848 MPD2YOL088C 834 nt4.59□□□□□ -1.67
PEX28P38848 GRE2YOL151W 1029 nt4.59□□□□□ -1.67
PEX28P38848 YML096WYML096W 1578 nt4.58□□□□□ -1.68
PEX28P38848 SWC4YGR002C 1431 nt4.58□□□□□ -1.68
PEX28P38848 SWF1YDR126W 1011 nt4.58□□□□□ -1.68
PEX28P38848 YDR320W-BYDR320W-B 138 nt4.58□□□□□ -1.68
PEX28P38848 YDR340WYDR340W 303 nt4.58□□□□□ -1.68
PEX28P38848 YER046W-AYER046W-A 330 nt4.58□□□□□ -1.68
PEX28P38848 SPO73YER046W 432 nt4.58□□□□□ -1.68
PEX28P38848 tS(AGA)D3tS(AGA)D3 83 nt4.58□□□□□ -1.68
PEX28P38848 IRC18YJL037W 675 nt4.58□□□□□ -1.68
PEX28P38848 CNB1YKL190W 528 nt4.58□□□□□ -1.68
PEX28P38848 RPS1AYLR441C 768 nt4.58□□□□□ -1.68
PEX28P38848 YML108WYML108W 318 nt4.58□□□□□ -1.68
PEX28P38848 VAM10YOR068C 345 nt4.58□□□□□ -1.68
PEX28P38848 AFT2YPL202C 1251 nt4.58□□□□□ -1.68
PEX28P38848 BBC1YJL020C 3474 nt4.58□□□□□ -1.68
PEX28P38848 TPS3YMR261C 3165 nt4.58□□□□□ -1.68
PEX28P38848 KAR2YJL034W 2049 nt4.58□□□□□ -1.68
PEX28P38848 SBE2YDR351W 2595 nt4.58□□□□□ -1.68
PEX28P38848 BIT2YBR270C 1638 nt4.57□□□□□ -1.68
PEX28P38848 CIT1YNR001C 1440 nt4.57□□□□□ -1.68
PEX28P38848 STE24YJR117W 1362 nt4.57□□□□□ -1.68
PEX28P38848 TGL4YKR089C 2733 nt4.57□□□□□ -1.68
PEX28P38848 YHI9YHR029C 885 nt4.57□□□□□ -1.68
PEX28P38848 FLD1YLR404W 858 nt4.57□□□□□ -1.68
PEX28P38848 SWM2YNR004W 441 nt4.57□□□□□ -1.68
PEX28P38848 MBA1YBR185C 837 nt4.57□□□□□ -1.68
PEX28P38848 YBR285WYBR285W 435 nt4.57□□□□□ -1.68
PEX28P38848 SAP4YGL229C 2457 nt4.57□□□□□ -1.68
PEX28P38848 YDL199CYDL199C 2064 nt4.57□□□□□ -1.68
PEX28P38848 RAD16YBR114W 2373 nt4.56□□□□□ -1.68
PEX28P38848 SSL1YLR005W 1386 nt4.56□□□□□ -1.68
PEX28P38848 YGR125WYGR125W 3111 nt4.56□□□□□ -1.68
PEX28P38848 SKG3YLR187W 3081 nt4.56□□□□□ -1.68
PEX28P38848 YCR045W-AYCR045W-A 351 nt4.56□□□□□ -1.68
PEX28P38848 TMA17YDL110C 453 nt4.56□□□□□ -1.68
PEX28P38848 SLX8YER116C 825 nt4.56□□□□□ -1.68
PEX28P38848 SEC53YFL045C 765 nt4.56□□□□□ -1.68
PEX28P38848 SUP56tL(CAA)A 82 nt4.56□□□□□ -1.68
PEX28P38848 SUP53tL(CAA)C 82 nt4.56□□□□□ -1.68
PEX28P38848 tL(CAA)DtL(CAA)D 82 nt4.56□□□□□ -1.68
PEX28P38848 tL(CAA)G1tL(CAA)G1 82 nt4.56□□□□□ -1.68
PEX28P38848 SUP54tL(CAA)G2 82 nt4.56□□□□□ -1.68
PEX28P38848 tL(CAA)G3tL(CAA)G3 82 nt4.56□□□□□ -1.68
PEX28P38848 tL(CAA)KtL(CAA)K 82 nt4.56□□□□□ -1.68
PEX28P38848 tL(CAA)LtL(CAA)L 82 nt4.56□□□□□ -1.68
PEX28P38848 tL(CAA)MtL(CAA)M 82 nt4.56□□□□□ -1.68
PEX28P38848 tL(CAA)NtL(CAA)N 82 nt4.56□□□□□ -1.68
PEX28P38848 RIO2YNL207W 1278 nt4.56□□□□□ -1.68
PEX28P38848 MRPL40YPL173W 894 nt4.56□□□□□ -1.68
PEX28P38848 YBR062CYBR062C 543 nt4.56□□□□□ -1.68
PEX28P38848 DAL5YJR152W 1632 nt4.56□□□□□ -1.68
PEX28P38848 SHE4YOR035C 2370 nt4.56□□□□□ -1.68
PEX28P38848 PAM1YDR251W 2493 nt4.55□□□□□ -1.68
PEX28P38848 NDC80YIL144W 2076 nt4.55□□□□□ -1.68
PEX28P38848 HAA1YPR008W 2085 nt4.55□□□□□ -1.68
PEX28P38848 UBX7YBR273C 1311 nt4.55□□□□□ -1.68
PEX28P38848 MET12YPL023C 1974 nt4.55□□□□□ -1.68
PEX28P38848 snR59snR59 78 nt4.55□□□□□ -1.68
PEX28P38848 GPI19YDR437W 423 nt4.55□□□□□ -1.68
PEX28P38848 API2YDR525W 330 nt4.55□□□□□ -1.68
PEX28P38848 VFA1YER128W 612 nt4.55□□□□□ -1.68
PEX28P38848 BIG1YHR101C 1008 nt4.55□□□□□ -1.68
PEX28P38848 RIM9YMR063W 720 nt4.55□□□□□ -1.68
PEX28P38848 EPO1YMR124W 2832 nt4.55□□□□□ -1.68
PEX28P38848 SLK19YOR195W 2466 nt4.55□□□□□ -1.68
PEX28P38848 ALR2YFL050C 2577 nt4.55□□□□□ -1.68
PEX28P38848 YNL284C-AYNL284C-A 1323 nt4.54□□□□□ -1.68
PEX28P38848 YDR262WYDR262W 819 nt4.54□□□□□ -1.68
PEX28P38848 CPR5YDR304C 678 nt4.54□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 22 ms