Protein–RNA interactions for Protein: P38235

YBR053C, Uncharacterized protein YBR053C, yeast

Predictions only

Length 358 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
YBR053C	P38235	YLL044W	YLL044W	447 nt		4.03	□□□□□ -1.76
YBR053C	P38235	RNP1	YLL046C	750 nt		4.03	□□□□□ -1.76
YBR053C	P38235	UBP16	YPL072W	1500 nt		4.03	□□□□□ -1.76
YBR053C	P38235	AIM14	YGL160W	1713 nt		4.03	□□□□□ -1.76
YBR053C	P38235	SSH1	YBR283C	1473 nt		4.03	□□□□□ -1.76
YBR053C	P38235	MDM34	YGL219C	1380 nt		4.02	□□□□□ -1.77
YBR053C	P38235	TPO2	YGR138C	1845 nt		4.02	□□□□□ -1.77
YBR053C	P38235	ARP5	YNL059C	2268 nt		4.02	□□□□□ -1.77
YBR053C	P38235	KIN3	YAR018C	1308 nt		4.02	□□□□□ -1.77
YBR053C	P38235	BNA7	YDR428C	786 nt		4.02	□□□□□ -1.77
YBR053C	P38235	YER119C-A	YER119C-A	372 nt		4.02	□□□□□ -1.77
YBR053C	P38235	HUR1	YGL168W	333 nt		4.02	□□□□□ -1.77
YBR053C	P38235	YGR039W	YGR039W	312 nt		4.02	□□□□□ -1.77
YBR053C	P38235	YHL034W-A	YHL034W-A	462 nt		4.02	□□□□□ -1.77
YBR053C	P38235	YJL119C	YJL119C	324 nt		4.02	□□□□□ -1.77
YBR053C	P38235	MAK16	YAL025C	921 nt		4.02	□□□□□ -1.77
YBR053C	P38235	HRK1	YOR267C	2280 nt		4.01	□□□□□ -1.77
YBR053C	P38235	SRS2	YJL092W	3525 nt		4.01	□□□□□ -1.77
YBR053C	P38235	SUP56	tL(CAA)A	82 nt		4.01	□□□□□ -1.77
YBR053C	P38235	SUP53	tL(CAA)C	82 nt		4.01	□□□□□ -1.77
YBR053C	P38235	tL(CAA)D	tL(CAA)D	82 nt		4.01	□□□□□ -1.77
YBR053C	P38235	tL(CAA)G1	tL(CAA)G1	82 nt		4.01	□□□□□ -1.77
YBR053C	P38235	SUP54	tL(CAA)G2	82 nt		4.01	□□□□□ -1.77
YBR053C	P38235	tL(CAA)G3	tL(CAA)G3	82 nt		4.01	□□□□□ -1.77
YBR053C	P38235	tL(CAA)K	tL(CAA)K	82 nt		4.01	□□□□□ -1.77
YBR053C	P38235	tL(CAA)L	tL(CAA)L	82 nt		4.01	□□□□□ -1.77
YBR053C	P38235	tL(CAA)M	tL(CAA)M	82 nt		4.01	□□□□□ -1.77
YBR053C	P38235	tL(CAA)N	tL(CAA)N	82 nt		4.01	□□□□□ -1.77
YBR053C	P38235	SPO13	YHR014W	876 nt		4.01	□□□□□ -1.77
YBR053C	P38235	NNF1	YJR112W	606 nt		4.01	□□□□□ -1.77
YBR053C	P38235	FLD1	YLR404W	858 nt		4.01	□□□□□ -1.77
YBR053C	P38235	YMR087W	YMR087W	855 nt		4.01	□□□□□ -1.77
YBR053C	P38235	GDT1	YBR187W	843 nt		4.01	□□□□□ -1.77
YBR053C	P38235	TGL4	YKR089C	2733 nt		4.01	□□□□□ -1.77
YBR053C	P38235	BBC1	YJL020C	3474 nt		4.01	□□□□□ -1.77
YBR053C	P38235	ACE2	YLR131C	2313 nt		4	□□□□□ -1.77
YBR053C	P38235	SIP1	YDR422C	2448 nt		4	□□□□□ -1.77
YBR053C	P38235	YDR269C	YDR269C	324 nt		4	□□□□□ -1.77
YBR053C	P38235	VAB2	YEL005C	849 nt		4	□□□□□ -1.77
YBR053C	P38235	PIR1	YKL164C	1026 nt		4	□□□□□ -1.77
YBR053C	P38235	ARC18	YLR370C	537 nt		4	□□□□□ -1.77
YBR053C	P38235	YMR153C-A	YMR153C-A	336 nt		4	□□□□□ -1.77
YBR053C	P38235	PBI2	YNL015W	228 nt		4	□□□□□ -1.77
YBR053C	P38235	GPI15	YNL038W	690 nt		4	□□□□□ -1.77
YBR053C	P38235	snR17a	snR17a	333 nt		4	□□□□□ -1.77
YBR053C	P38235	TOG1	YER184C	2385 nt		4	□□□□□ -1.77
YBR053C	P38235	ACK1	YDL203C	1872 nt		4	□□□□□ -1.77
YBR053C	P38235	MTR10	YOR160W	2919 nt		4	□□□□□ -1.77
YBR053C	P38235	AVT5	YBL089W	1380 nt		4	□□□□□ -1.77
YBR053C	P38235	ROD1	YOR018W	2514 nt		3.99	□□□□□ -1.77
YBR053C	P38235	SKG6	YHR149C	2205 nt		3.99	□□□□□ -1.77
YBR053C	P38235	BIK1	YCL029C	1323 nt		3.99	□□□□□ -1.77
YBR053C	P38235	DSN1	YIR010W	1731 nt		3.99	□□□□□ -1.77
YBR053C	P38235	FAD1	YDL045C	921 nt		3.99	□□□□□ -1.77
YBR053C	P38235	BCP1	YDR361C	852 nt		3.99	□□□□□ -1.77
YBR053C	P38235	TPM2	YIL138C	486 nt		3.99	□□□□□ -1.77
YBR053C	P38235	BNA1	YJR025C	534 nt		3.99	□□□□□ -1.77
YBR053C	P38235	YAL065C	YAL065C	387 nt		3.99	□□□□□ -1.77
YBR053C	P38235	YOR248W	YOR248W	303 nt		3.99	□□□□□ -1.77
YBR053C	P38235	SSL1	YLR005W	1386 nt		3.99	□□□□□ -1.77
YBR053C	P38235	VPS73	YGL104C	1461 nt		3.98	□□□□□ -1.77
YBR053C	P38235	MNN1	YER001W	2289 nt		3.98	□□□□□ -1.77
YBR053C	P38235	PPQ1	YPL179W	1650 nt		3.98	□□□□□ -1.77
YBR053C	P38235	STB2	YMR053C	2553 nt		3.98	□□□□□ -1.77
YBR053C	P38235	HLR1	YDR528W	1272 nt		3.98	□□□□□ -1.77
YBR053C	P38235	IES6	YEL044W	501 nt		3.98	□□□□□ -1.77
YBR053C	P38235	FAR7	YFR008W	666 nt		3.98	□□□□□ -1.77
YBR053C	P38235	CFD1	YIL003W	882 nt		3.98	□□□□□ -1.77
YBR053C	P38235	SDO1	YLR022C	753 nt		3.98	□□□□□ -1.77
YBR053C	P38235	SEC22	YLR268W	645 nt		3.98	□□□□□ -1.77
YBR053C	P38235	YLR297W	YLR297W	390 nt		3.98	□□□□□ -1.77
YBR053C	P38235	CAT5	YOR125C	702 nt		3.98	□□□□□ -1.77
YBR053C	P38235	YOR199W	YOR199W	330 nt		3.98	□□□□□ -1.77
YBR053C	P38235	OPY2	YPR075C	1083 nt		3.98	□□□□□ -1.77
YBR053C	P38235	RRN11	YML043C	1524 nt		3.98	□□□□□ -1.77
YBR053C	P38235	TFB2	YPL122C	1542 nt		3.98	□□□□□ -1.77
YBR053C	P38235	NNK1	YKL171W	2787 nt		3.98	□□□□□ -1.77
YBR053C	P38235	TPO5	YKL174C	1857 nt		3.98	□□□□□ -1.77
YBR053C	P38235	PIM1	YBL022C	3402 nt		3.98	□□□□□ -1.77
YBR053C	P38235	ASI3	YNL008C	2031 nt		3.97	□□□□□ -1.77
YBR053C	P38235	YOR022C	YOR022C	2148 nt		3.97	□□□□□ -1.77
YBR053C	P38235	TDA2	YER071C	381 nt		3.97	□□□□□ -1.77
YBR053C	P38235	GOS1	YHL031C	672 nt		3.97	□□□□□ -1.77
YBR053C	P38235	RGI2	YIL057C	495 nt		3.97	□□□□□ -1.77
YBR053C	P38235	RPL17B	YJL177W	555 nt		3.97	□□□□□ -1.77
YBR053C	P38235	VPS51	YKR020W	495 nt		3.97	□□□□□ -1.77
YBR053C	P38235	PAI3	YMR174C	207 nt		3.97	□□□□□ -1.77
YBR053C	P38235	ASI2	YNL159C	870 nt		3.97	□□□□□ -1.77
YBR053C	P38235	POP3	YNL282W	588 nt		3.97	□□□□□ -1.77
YBR053C	P38235	YSY6	YBR162W-A	198 nt		3.97	□□□□□ -1.77
YBR053C	P38235	FYV5	YCL058C	459 nt		3.97	□□□□□ -1.77
YBR053C	P38235	NCR1	YPL006W	3513 nt		3.97	□□□□□ -1.77
YBR053C	P38235	CDC6	YJL194W	1542 nt		3.96	□□□□□ -1.78
YBR053C	P38235	TSR1	YDL060W	2367 nt		3.96	□□□□□ -1.78
YBR053C	P38235	YLR152C	YLR152C	1731 nt		3.96	□□□□□ -1.78
YBR053C	P38235	SRP72	YPL210C	1923 nt		3.96	□□□□□ -1.78
YBR053C	P38235	HOM2	YDR158W	1098 nt		3.96	□□□□□ -1.78
YBR053C	P38235	CHZ1	YER030W	462 nt		3.96	□□□□□ -1.78
YBR053C	P38235	YER175W-A	YER175W-A	165 nt		3.96	□□□□□ -1.78
YBR053C	P38235	ECL1	YGR146C	636 nt		3.96	□□□□□ -1.78

Retrieved 100 of 7,029 protein–RNA pairs in 45.7 ms