Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF1P27539 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF1P27539 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.15■□□□□ 0.66
GDF1P27539 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.15■□□□□ 0.66
GDF1P27539 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF1P27539 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF1P27539 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.15■□□□□ 0.66
GDF1P27539 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF1P27539 RAP2CP1-201ENST00000605103 478 ntBASIC19.15■□□□□ 0.66
GDF1P27539 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.15■□□□□ 0.66
GDF1P27539 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
GDF1P27539 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.15■□□□□ 0.66
GDF1P27539 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDF1P27539 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
GDF1P27539 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GDF1P27539 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GDF1P27539 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.14■□□□□ 0.65
GDF1P27539 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.14■□□□□ 0.65
GDF1P27539 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDF1P27539 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDF1P27539 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.14■□□□□ 0.65
GDF1P27539 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
GDF1P27539 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.14■□□□□ 0.65
GDF1P27539 AC231657.2-201ENST00000624556 255 ntBASIC19.14■□□□□ 0.65
GDF1P27539 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GDF1P27539 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GDF1P27539 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.14■□□□□ 0.65
GDF1P27539 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDF1P27539 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GDF1P27539 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.14■□□□□ 0.65
GDF1P27539 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GDF1P27539 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.13■□□□□ 0.65
GDF1P27539 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
GDF1P27539 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GDF1P27539 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.13■□□□□ 0.65
GDF1P27539 DUX4L16-201ENST00000555130 1264 ntBASIC19.13■□□□□ 0.65
GDF1P27539 AC010536.3-201ENST00000620306 533 ntBASIC19.13■□□□□ 0.65
GDF1P27539 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GDF1P27539 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GDF1P27539 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GDF1P27539 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GDF1P27539 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
GDF1P27539 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.13■□□□□ 0.65
GDF1P27539 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GDF1P27539 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GDF1P27539 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GDF1P27539 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GDF1P27539 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GDF1P27539 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.12■□□□□ 0.65
GDF1P27539 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GDF1P27539 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GDF1P27539 MIR663A-201ENST00000385250 93 ntBASIC19.12■□□□□ 0.65
GDF1P27539 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.12■□□□□ 0.65
GDF1P27539 AC007322.1-201ENST00000426983 750 ntBASIC19.12■□□□□ 0.65
GDF1P27539 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
GDF1P27539 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.12■□□□□ 0.65
GDF1P27539 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GDF1P27539 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GDF1P27539 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GDF1P27539 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDF1P27539 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDF1P27539 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
GDF1P27539 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDF1P27539 ID1-201ENST00000376105 1233 ntBASIC19.11■□□□□ 0.65
GDF1P27539 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GDF1P27539 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
GDF1P27539 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.11■□□□□ 0.65
GDF1P27539 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GDF1P27539 SLC7A5P1-201ENST00000568957 537 ntBASIC19.11■□□□□ 0.65
GDF1P27539 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.11■□□□□ 0.65
GDF1P27539 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.11■□□□□ 0.65
GDF1P27539 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDF1P27539 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GDF1P27539 ECEL1P1-201ENST00000373592 1742 ntBASIC19.11■□□□□ 0.65
GDF1P27539 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDF1P27539 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF1P27539 AC061975.6-201ENST00000579045 1553 ntBASIC19.1■□□□□ 0.65
GDF1P27539 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF1P27539 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GDF1P27539 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF1P27539 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF1P27539 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF1P27539 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF1P27539 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
GDF1P27539 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
GDF1P27539 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF1P27539 CROCCP5-201ENST00000436658 830 ntBASIC19.1■□□□□ 0.65
GDF1P27539 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.1■□□□□ 0.65
GDF1P27539 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.1■□□□□ 0.65
GDF1P27539 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
GDF1P27539 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.1■□□□□ 0.65
GDF1P27539 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF1P27539 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms