Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 TAF4YMR005W 1167 nt2.15□□□□□ -2.07
RPL40BP0CH09 SIL1YOL031C 1266 nt2.15□□□□□ -2.07
RPL40BP0CH09 VBA4YDR119W 2307 nt2.15□□□□□ -2.07
RPL40BP0CH09 TRA1YHR099W 11235 nt2.15□□□□□ -2.07
RPL40BP0CH09 PST1YDR055W 1335 nt2.15□□□□□ -2.07
RPL40BP0CH09 CUS1YMR240C 1311 nt2.15□□□□□ -2.07
RPL40BP0CH09 YBR259WYBR259W 2067 nt2.14□□□□□ -2.07
RPL40BP0CH09 YGR293CYGR293C 462 nt2.14□□□□□ -2.07
RPL40BP0CH09 YLR462WYLR462W 609 nt2.14□□□□□ -2.07
RPL40BP0CH09 MPP6YNR024W 561 nt2.14□□□□□ -2.07
RPL40BP0CH09 INO4YOL108C 456 nt2.14□□□□□ -2.07
RPL40BP0CH09 YOR055WYOR055W 435 nt2.14□□□□□ -2.07
RPL40BP0CH09 SWD3YBR175W 948 nt2.14□□□□□ -2.07
RPL40BP0CH09 SOK1YDR006C 2706 nt2.14□□□□□ -2.07
RPL40BP0CH09 TOR1YJR066W 7413 nt2.13□□□□□ -2.07
RPL40BP0CH09 TIM21YGR033C 720 nt2.13□□□□□ -2.07
RPL40BP0CH09 TWF1YGR080W 999 nt2.13□□□□□ -2.07
RPL40BP0CH09 GLG2YJL137C 1143 nt2.13□□□□□ -2.07
RPL40BP0CH09 VPS51YKR020W 495 nt2.13□□□□□ -2.07
RPL40BP0CH09 RLP7YNL002C 969 nt2.13□□□□□ -2.07
RPL40BP0CH09 GCD10YNL062C 1437 nt2.13□□□□□ -2.07
RPL40BP0CH09 SNX41YDR425W 1878 nt2.13□□□□□ -2.07
RPL40BP0CH09 LYS9YNR050C 1341 nt2.13□□□□□ -2.07
RPL40BP0CH09 ICR1ICR1 3199 nt2.12□□□□□ -2.07
RPL40BP0CH09 GYP5YPL249C 2685 nt2.12□□□□□ -2.07
RPL40BP0CH09 YAL026C-AYAL026C-A 438 nt2.12□□□□□ -2.07
RPL40BP0CH09 RPS31YLR167W 459 nt2.12□□□□□ -2.07
RPL40BP0CH09 RSA3YLR221C 663 nt2.12□□□□□ -2.07
RPL40BP0CH09 YLR416CYLR416C 399 nt2.12□□□□□ -2.07
RPL40BP0CH09 ATP3YBR039W 936 nt2.12□□□□□ -2.07
RPL40BP0CH09 DAD3YBR233W-A 285 nt2.12□□□□□ -2.07
RPL40BP0CH09 REG1YDR028C 3045 nt2.12□□□□□ -2.07
RPL40BP0CH09 YIL092WYIL092W 1902 nt2.11□□□□□ -2.07
RPL40BP0CH09 YEL018C-AYEL018C-A 534 nt2.11□□□□□ -2.07
RPL40BP0CH09 SSN8YNL025C 972 nt2.11□□□□□ -2.07
RPL40BP0CH09 ATP11YNL315C 957 nt2.11□□□□□ -2.07
RPL40BP0CH09 YPR015CYPR015C 744 nt2.11□□□□□ -2.07
RPL40BP0CH09 HPA2YPR193C 471 nt2.11□□□□□ -2.07
RPL40BP0CH09 FES1YBR101C 873 nt2.11□□□□□ -2.07
RPL40BP0CH09 YGL176CYGL176C 1665 nt2.11□□□□□ -2.07
RPL40BP0CH09 ALG8YOR067C 1734 nt2.11□□□□□ -2.07
RPL40BP0CH09 MSH5YDL154W 2706 nt2.11□□□□□ -2.07
RPL40BP0CH09 SIN4YNL236W 2925 nt2.11□□□□□ -2.07
RPL40BP0CH09 YOL098CYOL098C 3114 nt2.11□□□□□ -2.07
RPL40BP0CH09 RPN4YDL020C 1596 nt2.1□□□□□ -2.07
RPL40BP0CH09 TOM70YNL121C 1854 nt2.1□□□□□ -2.07
RPL40BP0CH09 FIN1YDR130C 876 nt2.1□□□□□ -2.07
RPL40BP0CH09 YGL159WYGL159W 1113 nt2.1□□□□□ -2.07
RPL40BP0CH09 ALG5YPL227C 1005 nt2.1□□□□□ -2.07
RPL40BP0CH09 ARP5YNL059C 2268 nt2.1□□□□□ -2.07
RPL40BP0CH09 YDR239CYDR239C 2364 nt2.09□□□□□ -2.07
RPL40BP0CH09 YCL068CYCL068C 783 nt2.09□□□□□ -2.07
RPL40BP0CH09 PAU2YEL049W 363 nt2.09□□□□□ -2.07
RPL40BP0CH09 ISC10YER180C 804 nt2.09□□□□□ -2.07
RPL40BP0CH09 PAU12YGR294W 363 nt2.09□□□□□ -2.07
RPL40BP0CH09 YIR014WYIR014W 729 nt2.09□□□□□ -2.07
RPL40BP0CH09 PAU18YLL064C 363 nt2.09□□□□□ -2.07
RPL40BP0CH09 CDA2YLR308W 939 nt2.09□□□□□ -2.07
RPL40BP0CH09 PAU6YNR076W 363 nt2.09□□□□□ -2.07
RPL40BP0CH09 CYC2YOR037W 1101 nt2.09□□□□□ -2.07
RPL40BP0CH09 ARF3YOR094W 552 nt2.09□□□□□ -2.07
RPL40BP0CH09 POS5YPL188W 1245 nt2.09□□□□□ -2.07
RPL40BP0CH09 YPR053CYPR053C 456 nt2.09□□□□□ -2.07
RPL40BP0CH09 PAU24YBR301W 363 nt2.09□□□□□ -2.07
RPL40BP0CH09 SMC2YFR031C 3513 nt2.09□□□□□ -2.08
RPL40BP0CH09 DSN1YIR010W 1731 nt2.08□□□□□ -2.08
RPL40BP0CH09 EMI1YDR512C 564 nt2.08□□□□□ -2.08
RPL40BP0CH09 GCN4YEL009C 846 nt2.08□□□□□ -2.08
RPL40BP0CH09 SNL1YIL016W 480 nt2.08□□□□□ -2.08
RPL40BP0CH09 DID4YKL002W 699 nt2.08□□□□□ -2.08
RPL40BP0CH09 PEX17YNL214W 600 nt2.08□□□□□ -2.08
RPL40BP0CH09 HHF1YBR009C 312 nt2.08□□□□□ -2.08
RPL40BP0CH09 RAS1YOR101W 930 nt2.08□□□□□ -2.08
RPL40BP0CH09 MSS18YPR134W 807 nt2.08□□□□□ -2.08
RPL40BP0CH09 VMA9YCL005W-A 222 nt2.08□□□□□ -2.08
RPL40BP0CH09 CLN2YPL256C 1638 nt2.08□□□□□ -2.08
RPL40BP0CH09 YDR131CYDR131C 1671 nt2.08□□□□□ -2.08
RPL40BP0CH09 SPP382YLR424W 2127 nt2.08□□□□□ -2.08
RPL40BP0CH09 NET1YJL076W 3570 nt2.08□□□□□ -2.08
RPL40BP0CH09 RIX1YHR197W 2292 nt2.07□□□□□ -2.08
RPL40BP0CH09 DSL1YNL258C 2265 nt2.07□□□□□ -2.08
RPL40BP0CH09 EXO84YBR102C 2262 nt2.07□□□□□ -2.08
RPL40BP0CH09 MET6YER091C 2304 nt2.07□□□□□ -2.08
RPL40BP0CH09 YPK1YKL126W 2043 nt2.07□□□□□ -2.08
RPL40BP0CH09 HRD1YOL013C 1656 nt2.07□□□□□ -2.08
RPL40BP0CH09 ERP3YDL018C 678 nt2.07□□□□□ -2.08
RPL40BP0CH09 GPP2YER062C 753 nt2.07□□□□□ -2.08
RPL40BP0CH09 SDT1YGL224C 843 nt2.07□□□□□ -2.08
RPL40BP0CH09 ERG25YGR060W 930 nt2.07□□□□□ -2.08
RPL40BP0CH09 YIL086CYIL086C 309 nt2.07□□□□□ -2.08
RPL40BP0CH09 ERD2YBL040C 660 nt2.07□□□□□ -2.08
RPL40BP0CH09 BTS1YPL069C 1008 nt2.07□□□□□ -2.08
RPL40BP0CH09 ALG14YBR070C 714 nt2.07□□□□□ -2.08
RPL40BP0CH09 SSK2YNR031C 4740 nt2.07□□□□□ -2.08
RPL40BP0CH09 AEP2YMR282C 1743 nt2.07□□□□□ -2.08
RPL40BP0CH09 YBL005W-AYBL005W-A 1323 nt2.07□□□□□ -2.08
RPL40BP0CH09 YMR046CYMR046C 1323 nt2.07□□□□□ -2.08
RPL40BP0CH09 FBP26YJL155C 1359 nt2.07□□□□□ -2.08
RPL40BP0CH09 RGR1YLR071C 3249 nt2.06□□□□□ -2.08
RPL40BP0CH09 CDC60YPL160W 3273 nt2.06□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 23.2 ms