Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.2■□□□□ 0.66
FREM3P0C091 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.2■□□□□ 0.66
FREM3P0C091 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.2■□□□□ 0.66
FREM3P0C091 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FREM3P0C091 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FREM3P0C091 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FREM3P0C091 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
FREM3P0C091 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
FREM3P0C091 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM3P0C091 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM3P0C091 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FREM3P0C091 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.19■□□□□ 0.66
FREM3P0C091 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.19■□□□□ 0.66
FREM3P0C091 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM3P0C091 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.19■□□□□ 0.66
FREM3P0C091 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM3P0C091 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM3P0C091 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.19■□□□□ 0.66
FREM3P0C091 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
FREM3P0C091 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.19■□□□□ 0.66
FREM3P0C091 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM3P0C091 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FREM3P0C091 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM3P0C091 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM3P0C091 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM3P0C091 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.19■□□□□ 0.66
FREM3P0C091 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FREM3P0C091 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.18■□□□□ 0.66
FREM3P0C091 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.18■□□□□ 0.66
FREM3P0C091 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FREM3P0C091 SLC7A5P2-201ENST00000553010 536 ntBASIC19.18■□□□□ 0.66
FREM3P0C091 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.18■□□□□ 0.66
FREM3P0C091 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.18■□□□□ 0.66
FREM3P0C091 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FREM3P0C091 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FREM3P0C091 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FREM3P0C091 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FREM3P0C091 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.18■□□□□ 0.66
FREM3P0C091 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FREM3P0C091 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FREM3P0C091 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.18■□□□□ 0.66
FREM3P0C091 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.17■□□□□ 0.66
FREM3P0C091 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FREM3P0C091 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FREM3P0C091 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FREM3P0C091 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.17■□□□□ 0.66
FREM3P0C091 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.17■□□□□ 0.66
FREM3P0C091 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
FREM3P0C091 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.17■□□□□ 0.66
FREM3P0C091 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FREM3P0C091 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
FREM3P0C091 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FREM3P0C091 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FREM3P0C091 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FREM3P0C091 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FREM3P0C091 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.16■□□□□ 0.66
FREM3P0C091 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.16■□□□□ 0.66
FREM3P0C091 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FREM3P0C091 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.16■□□□□ 0.66
FREM3P0C091 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FREM3P0C091 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.16■□□□□ 0.66
FREM3P0C091 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.16■□□□□ 0.66
FREM3P0C091 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.16■□□□□ 0.66
FREM3P0C091 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
FREM3P0C091 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FREM3P0C091 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FREM3P0C091 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.15■□□□□ 0.66
FREM3P0C091 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.15■□□□□ 0.66
FREM3P0C091 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FREM3P0C091 AF201337.1-201ENST00000520239 748 ntBASIC19.15■□□□□ 0.66
FREM3P0C091 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
FREM3P0C091 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
FREM3P0C091 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FREM3P0C091 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FREM3P0C091 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.15■□□□□ 0.66
FREM3P0C091 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
FREM3P0C091 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FREM3P0C091 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FREM3P0C091 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FREM3P0C091 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.15■□□□□ 0.66
FREM3P0C091 CROCCP5-201ENST00000436658 830 ntBASIC19.15■□□□□ 0.66
FREM3P0C091 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.15■□□□□ 0.66
FREM3P0C091 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.15■□□□□ 0.66
FREM3P0C091 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.15■□□□□ 0.66
FREM3P0C091 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.15■□□□□ 0.66
FREM3P0C091 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FREM3P0C091 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
FREM3P0C091 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
FREM3P0C091 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FREM3P0C091 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FREM3P0C091 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.14■□□□□ 0.65
FREM3P0C091 AL050303.2-201ENST00000619798 666 ntBASIC19.14■□□□□ 0.65
FREM3P0C091 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FREM3P0C091 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FREM3P0C091 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.14■□□□□ 0.65
FREM3P0C091 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FREM3P0C091 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FREM3P0C091 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FREM3P0C091 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
FREM3P0C091 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms