Protein–RNA interactions for Protein: P05014

IFNA4, Interferon alpha-4, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA4P05014 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.28■□□□□ 0.36
IFNA4P05014 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.28■□□□□ 0.36
IFNA4P05014 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 AC244015.2-201ENST00000616358 1861 ntBASIC17.28■□□□□ 0.36
IFNA4P05014 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
IFNA4P05014 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.28■□□□□ 0.36
IFNA4P05014 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.28■□□□□ 0.36
IFNA4P05014 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.28■□□□□ 0.36
IFNA4P05014 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFNA4P05014 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
IFNA4P05014 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.27■□□□□ 0.36
IFNA4P05014 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA4P05014 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA4P05014 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA4P05014 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
IFNA4P05014 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA4P05014 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA4P05014 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.27■□□□□ 0.36
IFNA4P05014 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.27■□□□□ 0.36
IFNA4P05014 HCG11-201ENST00000411553 5696 ntBASIC17.27■□□□□ 0.36
IFNA4P05014 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA4P05014 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA4P05014 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA4P05014 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.27■□□□□ 0.36
IFNA4P05014 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.27■□□□□ 0.36
IFNA4P05014 CA15P2-201ENST00000611168 834 ntBASIC17.27■□□□□ 0.36
IFNA4P05014 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
IFNA4P05014 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA4P05014 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA4P05014 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
IFNA4P05014 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.27■□□□□ 0.35
IFNA4P05014 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
IFNA4P05014 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IFNA4P05014 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IFNA4P05014 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA4P05014 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA4P05014 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA4P05014 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA4P05014 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA4P05014 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.26■□□□□ 0.35
IFNA4P05014 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
IFNA4P05014 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA4P05014 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA4P05014 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
IFNA4P05014 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.26■□□□□ 0.35
IFNA4P05014 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.26■□□□□ 0.35
IFNA4P05014 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.26■□□□□ 0.35
IFNA4P05014 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.26■□□□□ 0.35
IFNA4P05014 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
IFNA4P05014 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.26■□□□□ 0.35
IFNA4P05014 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA4P05014 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA4P05014 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
IFNA4P05014 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 AC009102.2-201ENST00000606772 1639 ntBASIC17.25■□□□□ 0.35
IFNA4P05014 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.25■□□□□ 0.35
IFNA4P05014 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.25■□□□□ 0.35
IFNA4P05014 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
IFNA4P05014 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.25■□□□□ 0.35
IFNA4P05014 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
IFNA4P05014 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.25■□□□□ 0.35
IFNA4P05014 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.25■□□□□ 0.35
IFNA4P05014 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA4P05014 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
IFNA4P05014 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.25■□□□□ 0.35
IFNA4P05014 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.25■□□□□ 0.35
IFNA4P05014 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.24■□□□□ 0.35
IFNA4P05014 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA4P05014 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.24■□□□□ 0.35
IFNA4P05014 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA4P05014 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.24■□□□□ 0.35
IFNA4P05014 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA4P05014 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA4P05014 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.24■□□□□ 0.35
IFNA4P05014 AL035685.1-201ENST00000636663 812 ntBASIC17.24■□□□□ 0.35
IFNA4P05014 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA4P05014 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.24■□□□□ 0.35
IFNA4P05014 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms